Protein Info for BPHYT_RS04290 in Burkholderia phytofirmans PsJN

Annotation: glycosyl transferase family 2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 641 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF13641: Glyco_tranf_2_3" amino acids 101 to 283 (183 residues), 54.4 bits, see alignment E=3.3e-18 amino acids 359 to 580 (222 residues), 51.3 bits, see alignment E=3.1e-17 PF00535: Glycos_transf_2" amino acids 102 to 229 (128 residues), 92 bits, see alignment E=8.7e-30 amino acids 362 to 481 (120 residues), 73.6 bits, see alignment E=3.8e-24

Best Hits

KEGG orthology group: None (inferred from 100% identity to bpy:Bphyt_0883)

Predicted SEED Role

"Glycosyl transferase, group 2 family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2T0J8 at UniProt or InterPro

Protein Sequence (641 amino acids)

>BPHYT_RS04290 glycosyl transferase family 2 (Burkholderia phytofirmans PsJN)
MRSVSRIAAAVRLAFSTIGRQAEVRGGLGSALGYYASVIGREGLPGVVARVRRLKSGRGF
ADGPPRDEVYHEWISQYDTVTPAKQREIEAEIGLLARKPLISVVVPTFNSDERLLREMVA
SVQAQIYPHWELCIADDASTQPHVKAVLEEVAAADSRIKVVFRETNGHISEASNSALALA
TGEYVALLDHDDLLPPHALYMVARYINLHPHGRMFYSDEDKLTTEGKRTTPYFKCDWNPQ
MFLTQNMFSHLGVFETKLVRDAGGFRKGFEGSQDYDLALRCVELAGDDSVIHIPHVLYHW
RIVPGSTAGSGSEKPYALVAAIRALEDHLERANISATVEHPVESLGVLRVRYTLPSPQPK
VSIIIPTRDGLALLKQCVDSVFAYTLYQNFEIIIVDNGSVKPETMKYFDEVSQRPNVRVL
RDESPFNFSALNNHAARVATGEFLCLLNNDIEVISPDWLNEMVSLANLPRAGAVGACLWY
PTDALQHGGVVLGLGGIAGHMHHMMKRGHFGYFGRAVATQNLSAVTAACLVVKKSVYDEV
GGLEEDLAVAFNDVDFCMKLLKAGYRNIWTPYAEMYHHESATRGSDLDPDKYERFVSEIR
RMEARWEGWFERDPAYNPNLSLSCEVLPFTLASPPRIGQFE