Protein Info for BBR_RS13435 in Bifidobacterium breve UCC2003

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 456 transmembrane" amino acids 208 to 226 (19 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 96% identity to bln:Blon_1943)

Predicted SEED Role

"FIG00425099: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-positive bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (456 amino acids)

>BBR_RS13435 hypothetical protein (Bifidobacterium breve UCC2003)
MARRTWYRLDNIGKFYSSQAGRSSQTVFRYSAELADDIAPDILQHALDHAIARFPSFNVH
LLNGMFWHYLEQSDDKPRVEPEHLPICSRLHYGPKSMLFRVSYFRNRVNLEVSHIISDGR
GAINLFKSLLHAYIAERYDVPDVPSDYDGSDSDKAENSFDKYYERDKAGAAPGTKIYRLA
GPIDRAAPTFMEYHVSASKVLGAAHQCGVSLTSYLIAAILCAIRDVMPSRARNRAIRVDI
PVDLRAFFKSETVRNFYGMTYVAYTPADIEADEDSAKTSATSPDATGDDRQSATRTAHGN
GMGGLLTDEPLADIARHVQEQLGHATSRERVESHMNRMIALEKNPALRLAPSPAKDWVLE
LARFIADRETTTTVSNLGRVTLDERLARHVRSVSFLTTPASLNFTVCSFGDDLSIGISTI
YHDLNVIKNLCRILATQGISGRMSIAGVHVEKGASA