Protein Info for Ac3H11_4406 in Acidovorax sp. GW101-3H11

Annotation: Branched-chain amino acid transport protein AzlC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 274 transmembrane" amino acids 20 to 41 (22 residues), see Phobius details amino acids 49 to 71 (23 residues), see Phobius details amino acids 78 to 98 (21 residues), see Phobius details amino acids 110 to 129 (20 residues), see Phobius details amino acids 153 to 188 (36 residues), see Phobius details amino acids 193 to 211 (19 residues), see Phobius details amino acids 217 to 234 (18 residues), see Phobius details PF03591: AzlC" amino acids 27 to 167 (141 residues), 115.8 bits, see alignment E=1e-37

Best Hits

KEGG orthology group: None (inferred from 78% identity to aav:Aave_4691)

Predicted SEED Role

"Branched-chain amino acid transport protein AzlC"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165K5D0 at UniProt or InterPro

Protein Sequence (274 amino acids)

>Ac3H11_4406 Branched-chain amino acid transport protein AzlC (Acidovorax sp. GW101-3H11)
MSVLASLRSTVRHPSFRLAATDMAGTSLGIAAWGLVTGVAMVKSGMPVGMAVFMSLLVYA
GSAQLAVIPLLSVGAPLWVIWLTASCVNLRFVIFSSMWRSYFAHLPLRQRLALGYFSGDV
IYVAFMKRFPEPRPAPEQVPYFWGAASTNWLAWQVPSIAGILLANAVPLSWGLGFAGVLA
LLGVLLSLLFDRATWLATGVAATAAIAAFALPLKLNILVALAAAVAAGLLMEAVDRRRHK
PELLLVPADSVMPPEEREHVAAGDVVPLREERHP