Protein Info for Ac3H11_4384 in Acidovorax sp. GW101-3H11

Annotation: putative transport protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 422 transmembrane" amino acids 40 to 62 (23 residues), see Phobius details amino acids 74 to 94 (21 residues), see Phobius details amino acids 106 to 124 (19 residues), see Phobius details amino acids 130 to 151 (22 residues), see Phobius details amino acids 163 to 184 (22 residues), see Phobius details amino acids 190 to 212 (23 residues), see Phobius details amino acids 241 to 262 (22 residues), see Phobius details amino acids 273 to 292 (20 residues), see Phobius details amino acids 300 to 320 (21 residues), see Phobius details amino acids 326 to 345 (20 residues), see Phobius details amino acids 366 to 387 (22 residues), see Phobius details amino acids 393 to 414 (22 residues), see Phobius details PF07690: MFS_1" amino acids 42 to 380 (339 residues), 146 bits, see alignment E=1.4e-46 PF00083: Sugar_tr" amino acids 74 to 211 (138 residues), 33.1 bits, see alignment E=3e-12

Best Hits

KEGG orthology group: None (inferred from 86% identity to vei:Veis_0295)

Predicted SEED Role

"putative transport protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165K4X3 at UniProt or InterPro

Protein Sequence (422 amino acids)

>Ac3H11_4384 putative transport protein (Acidovorax sp. GW101-3H11)
LLFWAIAHTVPDSSSLPAAAAPQPSAPATPMTALERRSSVSLALIFALRMLGLFLVLPVF
ALEARKYPGGDDPALVGLAMGIYGLTQAVLQLPLGIASDRFGRKRVIVLGLLVFAAGSLL
AALADSLTGLLLGRALQGAGAVSAAVTALLADQTRDAVRTKAMALVGGSIGLMFAVALVL
APVLTAQIGLAGLFGLTCALALAGVAVVVWWVPPEPARHQNAPRGRLAEVWTQPDLLRLN
LGVFVLHTVQLSMWVAVPAMLVQAGLAKDQHWQVYLPAVVLSFVAMGGLFALERAGRLRA
ALLGAIALVLVVQAGLGLLAASGQPATLWVLGPLLFLFFCGFNALEASQPSLVSRMAPPQ
LRGAALGTYNTLQSLGLFAGGALGGALVKWAGAPGLFVATAALTALWLVLTWPLRPVGRG
GH