Protein Info for Ac3H11_4378 in Acidovorax sp. GW101-3H11

Annotation: Cellulose synthase operon protein C

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1445 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details PF13432: TPR_16" amino acids 38 to 101 (64 residues), 20.4 bits, see alignment (E = 3.4e-07) amino acids 291 to 346 (56 residues), 24.7 bits, see alignment (E = 1.5e-08) amino acids 398 to 452 (55 residues), 33.6 bits, see alignment (E = 2.5e-11) amino acids 473 to 527 (55 residues), 21.4 bits, see alignment (E = 1.7e-07) amino acids 507 to 563 (57 residues), 20.6 bits, see alignment (E = 2.9e-07) PF14559: TPR_19" amino acids 45 to 108 (64 residues), 28.5 bits, see alignment (E = 8.5e-10) amino acids 291 to 353 (63 residues), 25.8 bits, see alignment (E = 6.1e-09) amino acids 371 to 418 (48 residues), 30.9 bits, see alignment (E = 1.5e-10) amino acids 403 to 460 (58 residues), 33.8 bits, see alignment (E = 1.9e-11) amino acids 480 to 540 (61 residues), 40.5 bits, see alignment (E = 1.6e-13) PF13181: TPR_8" amino acids 399 to 425 (27 residues), 11.8 bits, see alignment (E = 0.00013) PF13176: TPR_7" amino acids 618 to 647 (30 residues), 15.3 bits, see alignment (E = 1e-05) amino acids 730 to 761 (32 residues), 14.2 bits, see alignment (E = 2.3e-05) PF05420: BCSC_C" amino acids 1080 to 1426 (347 residues), 365.9 bits, see alignment E=1.2e-112

Best Hits

Predicted SEED Role

"Cellulose synthase operon protein C"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165K4T5 at UniProt or InterPro

Protein Sequence (1445 amino acids)

>Ac3H11_4378 Cellulose synthase operon protein C (Acidovorax sp. GW101-3H11)
MSSKRRRHHHTLAMGLLASLMAPAAAWAQTGAEQTLLDQGQYWQERGDTERAGEAWQKLL
RLNPQNAQALYGMALVELNAQRPEGAQRYLTQLQAAHPRSPLVSRLQESIRTGRSAPQIE
TARQQARSGQASQALSTYQAALGERPPTGPLALEYYQTLGATAGGWDEARRGLSRLAQES
PEDPQIALALAQHLTYRESTRRDGIAQLARLAGRPDVGKAATESWRKALAWTGNRSADIP
LYQEFLRANPGDTAVQTRLAQAQNLQKQSQVASRPVATDPLRLRTTAGFQALEDGELDAA
EAAFLQVLEARPSDGDALGGLGILRLRQERFADARGLLERASRAGSAARWKQALDSATYW
SLVEQATSERERGDTAAARRTLEQAVRINPTEVTAETDLADLLVEAGQYDAAEAAYRRVL
ARQADNPDAVRGLVGVLAQNNKAAEALALVEKLSPSQQEKVGALGRLRAAQALGQARAAT
ERGDMAAARAALEDALLNDPASPWVRLDLARLYLRLGAVAEARGVMDGLLLSNPNMPEAL
YAGALLASEASDWPGALALLDRIPEKHRTRDIAALQKRVWVHVQAAAASALSAEGRQSEA
LATLAQAESFATQDTELLGALALAYADAGDPQRALGMVRQVLARTPRPDVGLRLQYAATL
LKTQQDVELSGILRQLQNAPMSERERRSFADIRRAYIVRQADGLREAGDLVAAYDTLAPL
LAEQADEPLAMAALARMYAANNDYAPAQALYARLLERSPTDVPLLLQTAAMATGAKDYAY
AESLLSVALARAPRDPEVLTAAGRLYRAQGKNTKATEFFTAAVAAENAQRDAVLAASGVA
AGPGRSGNPFAQRAGLQPQRAGGGLAVPGAAAVARSPVGYTPMQYAPQPVARSNAPAGLY
IPDPAGASRFAQALPLPLQAPPMTPASYYPEAASPAVGAAAVPLPAANGQRSAGTVSRAA
PQPTGRVVPASPAPLAAAPVAPMVPMAPMAPAASAGYIAPAQASVASYGSLPLPASTAAQ
RAAVAPQPSAWATAGTLGTVPDPTRPRSVRDELREVQQSQISSFSVGATARARQGEAGMS
QLSEIEAPVQLKMSVGDGHLILGVTPTGASAGAPGTPYGTQSRFGGGPATALDMPLRAPG
SQSDSGIGVSVGYESGGLKADIGTTPLGFGQSDVTGGVRYRMALNDQLTMAVDLSRRPVN
DSLLSFAGARDARTGDRWGGVSATGGRIDMTWDDGELGLYGYGSLHGITGTRVRSNARAE
LGGGMYWHVHRTSNADLTAGMSFSGLSYQRNLRYFTVGHGGYFSPQQFVSFGLPVEWAQR
NGRLSYQLKGSVGVQYFKEDAAPYFPNSPSRQAAAVLAASDALAFGETGATAIYPGQSRT
GLGYNLGAAMEYQMHPQVFLGGHLALNNARNYREFAGGLYVRYAFQPYNGLQVFPVNPLR
SPYAN