Protein Info for Ac3H11_3562 in Acidovorax sp. GW101-3H11

Annotation: putative membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 298 signal peptide" amino acids 1 to 15 (15 residues), see Phobius details transmembrane" amino acids 24 to 43 (20 residues), see Phobius details amino acids 63 to 81 (19 residues), see Phobius details amino acids 88 to 107 (20 residues), see Phobius details amino acids 119 to 140 (22 residues), see Phobius details amino acids 147 to 168 (22 residues), see Phobius details amino acids 180 to 199 (20 residues), see Phobius details amino acids 207 to 226 (20 residues), see Phobius details amino acids 238 to 260 (23 residues), see Phobius details amino acids 267 to 285 (19 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 86% identity to vei:Veis_3279)

Predicted SEED Role

"putative membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165J1I7 at UniProt or InterPro

Protein Sequence (298 amino acids)

>Ac3H11_3562 putative membrane protein (Acidovorax sp. GW101-3H11)
MVLAAFLFASMGVCVKIASDFFNSAELVCYRGLIGMAILWLLARSQKVTLATQYPGMHAW
RSLVGVTSLGAWFFAIAHLPLATAMTLNYMSSVWIAAFLIGGTLLAWRPSPATPRPALQG
PLVLTVLVGFIGVVLMLRPSLDQNQAFAGLIGLMSGLTAAFAYMQVVALSRIGEPESRTV
FYFAVGSAVAGGGALLFTGTSPWPGWQALWLLPIGVLAAGGQLCMTKAYASAKTQRGTLV
VANLQYSGIVFAGLYSVLLFGDKIPPIGWIGMALIVGSGIVATILRARAAPGAPAEEH