Protein Info for Ac3H11_313 in Acidovorax sp. GW101-3H11

Annotation: DNA mismatch repair protein MutL

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 684 TIGR00585: DNA mismatch repair protein MutL" amino acids 24 to 337 (314 residues), 284.1 bits, see alignment E=9.5e-89 PF02518: HATPase_c" amino acids 43 to 99 (57 residues), 36.8 bits, see alignment 9.2e-13 PF13589: HATPase_c_3" amino acids 46 to 143 (98 residues), 43.6 bits, see alignment E=6.1e-15 PF01119: DNA_mis_repair" amino acids 241 to 356 (116 residues), 127.4 bits, see alignment E=4.5e-41 PF08676: MutL_C" amino acids 497 to 640 (144 residues), 160.4 bits, see alignment E=4.8e-51

Best Hits

KEGG orthology group: K03572, DNA mismatch repair protein MutL (inferred from 75% identity to adn:Alide_1064)

Predicted SEED Role

"DNA mismatch repair protein MutL" in subsystem DNA repair, bacterial MutL-MutS system

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165JNF2 at UniProt or InterPro

Protein Sequence (684 amino acids)

>Ac3H11_313 DNA mismatch repair protein MutL (Acidovorax sp. GW101-3H11)
MPRVNDAPSPLAAAQPAPAPHRRPIRDLPDELISQIAAGEVVERPASVVRELVDNALDAG
ATQITLRLSAGGVRLITVEDDGGGIPQEELPVALRRHATSKITNLDDLETVATMGFRGEA
LAAIASVSEMSLLSRPAHQASAFLLDARSGELRPAARSTGTTVEVKELFFSTPARRKFLK
TDATELAHCIESVRRHALARPDVGFAIWHEGKLVEQWRATFVPGQGDPQDAHDALARRLS
DVLGEDFVTQSVAVQHRVGPVTVTGRAGLPDAARSRPDHQYCYVNGRFVRDKVLTHAARS
AYEDVLHGHKQPIYALYVEIDPARVDVNVHPTKIEVRFRDSREVHQAVRHAVENALAAPR
AAALAAANAAAPAPTAENFDKKQALPPAWQAQAAMKFEERGHRVQDLQALWAPSSSTSSS
SSNGSSPDHGAPAASPASIGGLWAPSAQPSEPVEHQAAPDGPQTAPEAAETTATADTTTW
PTGRDSTTAHWPLGRAVAQLHGVYILAENAQGMVIVDMHAAHERIVYERLKAQVDSGARI
ASQPLLIPATFAATPQEVATAEDSTEVLATLGLEVVPFSPKTLAVRAVPTTLAQGDPVEL
ARSVLAELAQHDATTVVQRARNEILGTMACHGAVRANRKLTLDEMNALLRQMETTDRSDQ
CNHGRPTWRQLSMKELDGLFLRGR