Protein Info for Ac3H11_2539 in Acidovorax sp. GW101-3H11

Annotation: Mlr1315 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 288 transmembrane" amino acids 53 to 74 (22 residues), see Phobius details amino acids 89 to 108 (20 residues), see Phobius details amino acids 119 to 136 (18 residues), see Phobius details amino acids 142 to 160 (19 residues), see Phobius details amino acids 167 to 187 (21 residues), see Phobius details amino acids 220 to 238 (19 residues), see Phobius details amino acids 264 to 285 (22 residues), see Phobius details PF07786: HGSNAT_cat" amino acids 44 to 272 (229 residues), 235 bits, see alignment E=3.9e-74

Best Hits

KEGG orthology group: None (inferred from 73% identity to aav:Aave_2952)

Predicted SEED Role

"Mlr1315 protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165KW65 at UniProt or InterPro

Protein Sequence (288 amino acids)

>Ac3H11_2539 Mlr1315 protein (Acidovorax sp. GW101-3H11)
MAPKPGAHPSNRRLTGHAMKRPLPVSPSSASSPWTGTPAATGQRYDAVDALRGLAMVWMT
AFHFCFDLSHFGFWPQNFRVDPFWTTQRTFIVSLFLFCAGLGQAIAWHQGQGWQRFGRRW
MQIAGCALLVTLGSFAMFPQSFIYFGVLHGMAVMLLIARCTSGWGRWLWLAGLVAVALPP
LAQHLLAGSWAEAAPWFNGRALNWLGLVSRKPFTEDYVPVFPWLGVMWWGLAAGQWMLAR
RSVLLSLPLPGIVRPVSVLGRWSLSYYMLHQPVMMGLLMVVAWWLGRS