Protein Info for Ac3H11_1917 in Acidovorax sp. GW101-3H11

Annotation: conserved hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 296 transmembrane" amino acids 149 to 166 (18 residues), see Phobius details PF12146: Hydrolase_4" amino acids 24 to 240 (217 residues), 60.4 bits, see alignment E=2.6e-20 PF00561: Abhydrolase_1" amino acids 37 to 147 (111 residues), 34.1 bits, see alignment E=3.5e-12 PF12697: Abhydrolase_6" amino acids 49 to 228 (180 residues), 32.6 bits, see alignment E=2.1e-11

Best Hits

KEGG orthology group: None (inferred from 71% identity to vap:Vapar_0815)

Predicted SEED Role

"conserved hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165KLB0 at UniProt or InterPro

Protein Sequence (296 amino acids)

>Ac3H11_1917 conserved hypothetical protein (Acidovorax sp. GW101-3H11)
MDKQTLQVNGAVSLALRVYEPEGAPRASVVIGGAMGVRQAFYEAFALWMAQQGFRVTTFD
YRGHGDSLQGAMRDVKADLFDWAEDYEAVITAAKAALPSQPLYLLGHSLGAQLPGLLKKP
EQVAGLLSVAAGSGYWRDNAPQLKRIVPYFWWVLVPLATRLCGYFPGRTLKKVGDLPAGV
ILQWRRWCLHPAYMVGAEGPAVAQSYGAVRFPVLALSMADDELMTLRGTHNLVNLYANTE
RQVESITPADLQVRRIGHFGFFRDQFRQSLWPRAAAALVALGGGGMPHGEVTGTTA