Protein Info for Ac3H11_17 in Acidovorax sp. GW101-3H11

Annotation: FHA domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 332 transmembrane" amino acids 129 to 149 (21 residues), see Phobius details amino acids 161 to 182 (22 residues), see Phobius details amino acids 199 to 220 (22 residues), see Phobius details amino acids 226 to 247 (22 residues), see Phobius details amino acids 255 to 277 (23 residues), see Phobius details PF00498: FHA" amino acids 33 to 102 (70 residues), 34.9 bits, see alignment E=8.6e-13

Best Hits

Predicted SEED Role

"FHA domain protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165HYC2 at UniProt or InterPro

Protein Sequence (332 amino acids)

>Ac3H11_17 FHA domain protein (Acidovorax sp. GW101-3H11)
MSTMPTTTTLGLIEAHDRHGALLARAPITRWPVTVGRALDCDLVLDDPFVAPRHLRIDRT
VDEHHTVQVEVLETRNGARLQRKRHAQGERFDWPGGTPIDLGHTHITLRLADAPIADEQA
LPEFPWRTVGTTAALVVLVGAAAVASSWLESRDSSQYLKSLPSVLLMLLLVMSAWSGLWA
VANKMFAGRLQFWRHVRIACTVYLASEALRLVANLAAFSFSLEALSQFASVLGVLVLAWA
LYAHLATVLPRRRVGLAWTVAAVVALGVPAWLGAQWLNRMRLTNEMYMSSLFPPSLRVAP
TAPVDQLLQDAETLRAKLDRRLKDDGLADEDE