Protein Info for Ac3H11_1614 in Acidovorax sp. GW101-3H11

Annotation: Opine oxidase subunit A

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 468 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF01494: FAD_binding_3" amino acids 10 to 39 (30 residues), 22.2 bits, see alignment (E = 2e-08) PF07992: Pyr_redox_2" amino acids 10 to 322 (313 residues), 74.5 bits, see alignment E=2.5e-24 PF13450: NAD_binding_8" amino acids 11 to 49 (39 residues), 27.4 bits, see alignment 8.6e-10 PF04324: Fer2_BFD" amino acids 378 to 430 (53 residues), 36.7 bits, see alignment 1.1e-12 PF17806: SO_alpha_A3" amino acids 382 to 455 (74 residues), 34.1 bits, see alignment E=6.7e-12

Best Hits

KEGG orthology group: None (inferred from 78% identity to vap:Vapar_0304)

Predicted SEED Role

"Opine oxidase subunit A"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165KAG1 at UniProt or InterPro

Protein Sequence (468 amino acids)

>Ac3H11_1614 Opine oxidase subunit A (Acidovorax sp. GW101-3H11)
MTAAPALQPVIVGAGPAGIRAAQTLAAHGVRPVLIDEAARGGGQIYRRPPAHFTRAAATL
YGTEATRATALHAALETLHDQIDYQPDSLVWNAQGSLLDVLHGPTQTTRSVPYSQLIVAS
GATDRVLPITGWTLPGVYTLGGAQVALKFQGCAIGSRVVLMGTGPLLYLVAYQYAKAGAT
VAAVLDTARLSDQLAAVPAMLTQPAVFAKGIYYVAWLRARGIPIHSGIRPVRVLGDQRVA
GVVWADGAGREHTLACDAVGLGYALRSETQLADLLGCRFAWAPLHRAHLPERDAQGRSSV
PGVYLAGDGAGIMGADAAEWAGELAALALLQDHGVAVDTARMQTLQGQLGHLMKFRQGLE
RAFPFPTDWAAHAPDALVVCRCENITAGDLRACVRDTGADEMNRLKALTRVGMGRCQGRS
CGVAAAEILAQATGKPVELVGRLRGQAPIKPIPIHLQTRPSADAGAAA