Protein Info for Ac3H11_1547 in Acidovorax sp. GW101-3H11

Annotation: LPS biosynthesis protein WbpG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 427 TIGR03573: N-acetyl sugar amidotransferase" amino acids 50 to 398 (349 residues), 266.8 bits, see alignment E=1.8e-83

Best Hits

KEGG orthology group: None (inferred from 40% identity to fnu:FN1679)

Predicted SEED Role

"LPS biosynthesis protein WbpG"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165K8V7 at UniProt or InterPro

Protein Sequence (427 amino acids)

>Ac3H11_1547 LPS biosynthesis protein WbpG (Acidovorax sp. GW101-3H11)
MGRWLRNGRSSYRDCGWAPHSLYTPPMGTAVPPATAGARSPPEVGARDTMKYCTQCLQPD
TRPNTAFTDAGLCPACDYFAHLHHVDWQERYEILEDLLAQYPRKRGQFDCIIGVSGGKDS
TRQALWVRDKLGLKPLLACLSYPPQQVTQRGVDNISNLIEQGFDVVIAAPAPETWRLLMR
ESFARFTNWARSTELALFSSVPQLAIRYNVPLILWGENPGLQLGDLKTLGRTGYDGNNLR
NMNTLSGGAMAWMAETPGVDLRNLQAYRYPAPQEFDQHRLQIIYLGWFLGDWSLVNNGMY
SCTNGLDIRTDTVENTGDLLGITSLDEDWVTLNQMIKYYKFGFGRVTDYVNEEIRLGRLT
REQGIGLVEQYDDACAPSYIKSFCDYIGIHVDAFWTQVHSSVNRTLFDVDAVTGRINRRY
KVGAGLP