Protein Info for Ac3H11_1459 in Acidovorax sp. GW101-3H11

Annotation: Type IV fimbrial biogenesis protein PilX

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 202 PF13681: PilX" amino acids 84 to 194 (111 residues), 39.2 bits, see alignment E=4.2e-14

Best Hits

Predicted SEED Role

"Type IV fimbrial biogenesis protein PilX" in subsystem Type IV pilus

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165K6U9 at UniProt or InterPro

Protein Sequence (202 amino acids)

>Ac3H11_1459 Type IV fimbrial biogenesis protein PilX (Acidovorax sp. GW101-3H11)
MLLALWASRTAFFNELIVGNDTDYQRAFEAAQVMLQDAELDIRQGTEVGTNQRAVVSSTF
YPTAHDELDALTYVLDAQTTKCFNGICQFRTGAQDFWNDSTMMNAMIATNVGARYGQYTG
ASAGTSSNSILADTTAGRGAWYWVEVIKYEPKETGPGVLTGAEPEVVNAKIFYRITAIAR
GLKPSTQVVLQNIVAFPSISGE