Protein Info for AZOBR_RS20470 in Azospirillum brasilense Sp245

Annotation: methionine biosynthesis protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 198 TIGR02081: methionine biosynthesis protein MetW" amino acids 2 to 195 (194 residues), 252.3 bits, see alignment E=1.3e-79 PF07021: MetW" amino acids 2 to 195 (194 residues), 266.1 bits, see alignment E=5.1e-83 PF13489: Methyltransf_23" amino acids 8 to 160 (153 residues), 42 bits, see alignment E=2.5e-14 PF13847: Methyltransf_31" amino acids 14 to 104 (91 residues), 38.2 bits, see alignment E=3.6e-13 PF13649: Methyltransf_25" amino acids 18 to 102 (85 residues), 37.6 bits, see alignment E=8.9e-13 PF08242: Methyltransf_12" amino acids 19 to 101 (83 residues), 33.3 bits, see alignment E=2e-11 PF08241: Methyltransf_11" amino acids 19 to 103 (85 residues), 40.5 bits, see alignment E=1.1e-13

Best Hits

KEGG orthology group: None (inferred from 82% identity to azl:AZL_a03890)

Predicted SEED Role

"Homoserine O-acetyltransferase (EC 2.3.1.31)" in subsystem Methionine Biosynthesis (EC 2.3.1.31)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.31

Use Curated BLAST to search for 2.3.1.31

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8ANW4 at UniProt or InterPro

Protein Sequence (198 amino acids)

>AZOBR_RS20470 methionine biosynthesis protein (Azospirillum brasilense Sp245)
IRTDLKLIAEMVEPGSRVLDVGCGDGALLAFLSRQKGVDARGIELSMDGVHQCVAQGLSV
IQGDAETDLKDYPPGAFDYVILSQTLQAMREPRTVLETMTRIGRRAIVSVPNFGYWRIRV
QLLLTGRMPVTEKLGYQWWETPNIHFCTIKDFVVLAEEMGIRIERCMIVDRAGRVTGHAH
SGLANLLGEQGVFLLRRD