Protein Info for AZOBR_RS20460 in Azospirillum brasilense Sp245

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 187 transmembrane" amino acids 55 to 78 (24 residues), see Phobius details PF06821: Ser_hydrolase" amino acids 6 to 176 (171 residues), 206.6 bits, see alignment E=2.5e-65 PF12697: Abhydrolase_6" amino acids 6 to 159 (154 residues), 28.8 bits, see alignment E=2e-10

Best Hits

KEGG orthology group: K07002, (no description) (inferred from 54% identity to xau:Xaut_2551)

Predicted SEED Role

"putative esterase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8ANW2 at UniProt or InterPro

Protein Sequence (187 amino acids)

>AZOBR_RS20460 hypothetical protein (Azospirillum brasilense Sp245)
MAKASVLIVPGLGNSGPDHWQSWLQQRHPSFTRVEQADWDAPASEDWVRSLEQAVAAAAA
PVVLVAHSLGCMTVAHWALRSGSSVGKVAAALLVAPPDVESAEHTPPEVHGFAPVPTDPL
PFRTVVLASHNDPYAPIARSCGFAVGWGADFIDGGDLEHINTAAGYGSWPDGERLVLDLL
RAVDSGA