Protein Info for AZOBR_RS14575 in Azospirillum brasilense Sp245

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 106 PF01906: YbjQ_1" amino acids 1 to 104 (104 residues), 124.7 bits, see alignment E=1.1e-40

Best Hits

Swiss-Prot: 63% identical to Y1619_AROAE: UPF0145 protein AZOSEA16190 (AZOSEA16190) from Aromatoleum aromaticum (strain EbN1)

KEGG orthology group: None (inferred from 63% identity to eba:ebA2875)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8AQ57 at UniProt or InterPro

Protein Sequence (106 amino acids)

>AZOBR_RS14575 hypothetical protein (Azospirillum brasilense Sp245)
MIVTSTDTVEGRPVTQYLGMVAGEAILGVNMFRDLFSGIRDIVGGRAGGYQNALRDAREA
AFADLQDAARALGADAIVGVDIDYEVLGKENGMLMVSINGTAVRLG