Protein Info for AZOBR_RS12795 in Azospirillum brasilense Sp245

Annotation: FIST domain containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 378 PF08495: FIST" amino acids 29 to 230 (202 residues), 157 bits, see alignment E=5.4e-50 PF10442: FIST_C" amino acids 234 to 362 (129 residues), 78 bits, see alignment E=7.5e-26

Best Hits

KEGG orthology group: None (inferred from 70% identity to azl:AZL_d02850)

Predicted SEED Role

"GfdT"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8AGG6 at UniProt or InterPro

Protein Sequence (378 amino acids)

>AZOBR_RS12795 FIST domain containing protein (Azospirillum brasilense Sp245)
MAEDARAAARDLFEGLCGRNPAAAAELEMVLVFCSAHYDQVELAAALAELFGPVPVVGCT
TAGEITPFGYAAGSLVGIGFPRADFTIATQRIDDLDRFSIADAPRVLRSLMEQRDVALAA
RTDAFPDHGSFAFLMIDGMSRAEEMVVSALHSVLMDIPLFGGSAGDELRFERTFVLHEGR
FHTNAAVLMLVTTARRFVVFRTEHFVASDAKMVVTGADPQRRIVTEINAEPAGREYARMV
GLEGEPLTPLIFAAYPVVVRVGGEYHVRSIQKVNDDESLTFYCAIDEGIVLTVARGVDPV
ENLEEMMRKLAAEVGGPPDLVLGCDCILRRLELEQRQLKHVMSAALARHNVVGFCAYGEQ
YNAMHVNQTFTGVAIGAR