Protein Info for AZOBR_RS11035 in Azospirillum brasilense Sp245

Annotation: antibiotic biosynthesis monooxygenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 106 PF03992: ABM" amino acids 1 to 78 (78 residues), 72.4 bits, see alignment E=1.4e-24

Best Hits

KEGG orthology group: K07145, (no description) (inferred from 78% identity to azl:AZL_c04360)

Predicted SEED Role

"Hypothetical, distant similarity with heme-degrading oxygenase IsdG" in subsystem Heme, hemin uptake and utilization systems in GramPositives

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8ANC8 at UniProt or InterPro

Protein Sequence (106 amino acids)

>AZOBR_RS11035 antibiotic biosynthesis monooxygenase (Azospirillum brasilense Sp245)
MYIAMNRFRVRPDSEQDFEEVWLNREVHLNTVPGFVEFHMLRGPRYEDHRLYSSHTVWES
EAHFQAWTRSEEFRAAHRGAGDRKPLYLGPPQFEGFEVIQTVGREG