Protein Info for AZOBR_RS10785 in Azospirillum brasilense Sp245

Annotation: transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 513 transmembrane" amino acids 20 to 41 (22 residues), see Phobius details amino acids 54 to 72 (19 residues), see Phobius details amino acids 84 to 104 (21 residues), see Phobius details amino acids 109 to 134 (26 residues), see Phobius details amino acids 143 to 164 (22 residues), see Phobius details amino acids 170 to 192 (23 residues), see Phobius details amino acids 204 to 224 (21 residues), see Phobius details amino acids 233 to 253 (21 residues), see Phobius details amino acids 274 to 294 (21 residues), see Phobius details amino acids 306 to 327 (22 residues), see Phobius details amino acids 339 to 358 (20 residues), see Phobius details amino acids 367 to 390 (24 residues), see Phobius details amino acids 402 to 426 (25 residues), see Phobius details amino acids 474 to 494 (21 residues), see Phobius details PF06609: TRI12" amino acids 11 to 428 (418 residues), 34.3 bits, see alignment E=1.5e-12 TIGR00711: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family" amino acids 18 to 493 (476 residues), 243.8 bits, see alignment E=1.7e-76 PF07690: MFS_1" amino acids 23 to 417 (395 residues), 180.1 bits, see alignment E=9e-57 PF00083: Sugar_tr" amino acids 54 to 168 (115 residues), 42.5 bits, see alignment E=6.3e-15

Best Hits

KEGG orthology group: None (inferred from 77% identity to azl:AZL_010850)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8AN71 at UniProt or InterPro

Protein Sequence (513 amino acids)

>AZOBR_RS10785 transporter (Azospirillum brasilense Sp245)
MTDASNDHAVFTHREIMRVFSGVALAMLMAAMDQTIVATALPTMAHDLGSLENLPWVVTA
YLLASTSTTPIYGKLSDLYGRKRVLQVAIFLFLVGSVLCALAQSMGQLILFRGIQGLGGG
GLMALAFTIIGDVVAPRERGRYQGYIGGIFALSSVAGPLLGGIFTERLSWHWIFLINLPL
GAAALLMTSRALDRLPAGRTKPTIDYLGAALLMGTVTSLLFVVSRAGVALPWTSPTILGL
CVLGLMMLGVFLWHERRVEEPILPLHLFREPVVAVANPVVAVSAMVLFAGIVYLPLRSQL
VAGTSATTSGFLLLPMVLGMVLGAGGGGRLISKSGRYKVFPLAGLALAALMYLALGLSPT
VSESGLWSTLILVPLGIGLGLVMPVMTVAVQNAVDRRDLGAATASVGFFRSLGGSVGVAV
FGAVFAADVEARLNAAGLPGISGREVMERGPSALANLAPVARAAAQSVFEHGFSTLFLLA
AGLAVVSFVLTLFLKELPLRSAADAGKAGAEVV