Protein Info for AZOBR_RS10540 in Azospirillum brasilense Sp245

Annotation: peptidase M16

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 418 PF00675: Peptidase_M16" amino acids 13 to 159 (147 residues), 145.5 bits, see alignment E=1.2e-46 PF05193: Peptidase_M16_C" amino acids 167 to 338 (172 residues), 137.6 bits, see alignment E=4.3e-44

Best Hits

KEGG orthology group: None (inferred from 85% identity to azl:AZL_009540)

Predicted SEED Role

"Mitochondrial processing peptidase-like protein (EC 3.4.24.64)" in subsystem ZZ gjo need homes (EC 3.4.24.64)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.24.64

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8AN17 at UniProt or InterPro

Protein Sequence (418 amino acids)

>AZOBR_RS10540 peptidase M16 (Azospirillum brasilense Sp245)
MSIRVTTLPNGLRVATDTMPGVQSVSLGCWVGVGTRNESASVNGVAHLVEHMLFKGTERR
SAFRISEEIENVGGQLNAYTTREQTAYYAKVLHEDAALALDLIADMLQNSVLDSEELVRE
RTVVLQEIGQSADTPDDIIFDHFQSTAYPGQALGRPVLGSADIVGALSRPALVDYIDGHY
GAPGIVLAAAGRLEHDRLVDMALSAFDGLSSRPAPESEDARYAGGDFREARDLEQMHLVL
GFDGVGVHDPDYYAHSVMSTLLGGGMSSRLFQEVREKRGLVYSIYTFSGAYRDGGLFGVY
AGTGEDEVAELVPVVCDELMRVTEDVTEEEVARAAAQLRAGTLMALESSMSRCEQLGQQL
LVYGRPVPVEEIVEKIGAVDRESIVRVARRLRESRPTVAALGPIGRLEEYDRIAARFR