Protein Info for AZOBR_RS10125 in Azospirillum brasilense Sp245

Annotation: sulfite reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 562 PF03460: NIR_SIR_ferr" amino acids 63 to 122 (60 residues), 73.8 bits, see alignment 7.5e-25 amino acids 358 to 409 (52 residues), 37.4 bits, see alignment 1.7e-13 PF01077: NIR_SIR" amino acids 130 to 283 (154 residues), 160.1 bits, see alignment E=3e-51 amino acids 423 to 558 (136 residues), 61.4 bits, see alignment E=7.1e-21

Best Hits

KEGG orthology group: K00381, sulfite reductase (NADPH) hemoprotein beta-component [EC: 1.8.1.2] (inferred from 82% identity to azl:AZL_009370)

Predicted SEED Role

"Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2)" in subsystem Cysteine Biosynthesis (EC 1.8.1.2)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.8.1.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8AMS0 at UniProt or InterPro

Protein Sequence (562 amino acids)

>AZOBR_RS10125 sulfite reductase (Azospirillum brasilense Sp245)
MNHIAPGRNAGVYSYDDIDRRFVAERVEQFRAQVERRLSGELTEDEFKPLRLMNGLYLQL
HAYMLRIAVPYGVLTARQLRKLAEIGRKYDKGYGHFTTRQNLQFNWIKLEDTPAILHELA
EVDMHALQTSGNCVRNVTTDQFVGAARDEVVDGRVYAEILRQWTTLHPEFTFLPRKFKIA
IMGSDADRAAIRVHDVGVFAKRNERGEVGFTFYVGGGLGRSPFIGKLIRDWVPEEDFVAY
LEAILRVYNQYGRRDNIYKARIKILVHELGQEKFTQEVEEEFARLRGPKYRLAPEVVDEI
RRRFGGPAFETLTDEPESFQAAKAANPDFARWVAVNVLAHKVPGYAAATISLKPAGGIPG
DATSEQMELIADLADAHSFGELRVSHAQNLVLAHVRQDALFTLWTALEANGLGTPNAGLI
GDIIACPGLDYCALANARSIPLAQAISARFADPARQQTIGELGIKISGCINACGHHHVGA
IGILGVDKKGEEFYQITVGGDPTLTTAIGDILGPAVTADETVDAIEAIVEVYLSNRHDGE
RFIDTLKRVGHGPFKERVYAAH