Protein Info for AZOBR_RS10120 in Azospirillum brasilense Sp245

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 165 PF06073: DUF934" amino acids 51 to 156 (106 residues), 127.5 bits, see alignment E=9.2e-42

Best Hits

KEGG orthology group: None (inferred from 78% identity to azl:AZL_009390)

Predicted SEED Role

"Oxidoreductase probably involved in sulfite reduction"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8AMR9 at UniProt or InterPro

Protein Sequence (165 amino acids)

>AZOBR_RS10120 hypothetical protein (Azospirillum brasilense Sp245)
MPLIKDGRIVEDEWVAVADGEPVPADRPAVVTFERWQAERASFDGRNAALGVRVKSGTLA
PAIAPDLDRFALVAIEFPKFRDGRGFSTARELRERFGYQGEIRAVGHVIPDQYRFLLRTG
FTSAEAPENTNPESWAHALTEITVAFQPSLDDPQPLSLLRRRLGS