Protein Info for AZOBR_RS08935 in Azospirillum brasilense Sp245

Annotation: exported protein of unknown function

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 226 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF02493: MORN" amino acids 107 to 129 (23 residues), 18.6 bits, see alignment (E = 6.7e-08) amino acids 130 to 150 (21 residues), 9.3 bits, see alignment (E = 6.3e-05)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8ALZ6 at UniProt or InterPro

Protein Sequence (226 amino acids)

>AZOBR_RS08935 exported protein of unknown function (Azospirillum brasilense Sp245)
MRTRFLLTGLVALSLGVFLSCPVQGKERQTAERVLTDPVSGCRVRDPDPSRGKSVRWTGA
CRNGFAHGAGVLETFNGAEPADWIEAVFVDGWAEGPGRSGREDGTIFQGRFRHGLATGPG
TLTLPDGHRYVGGFAFGRPTGQGEFIASMGLRYRARVDRDGRVWPGALLGSKPAEPIQSA
ERPEPRGKAAPGSLEEWLRTPPWDYRDPAGRDPGQPNRDRPGRDRR