Protein Info for AZOBR_RS07855 in Azospirillum brasilense Sp245

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 334 transmembrane" amino acids 16 to 37 (22 residues), see Phobius details amino acids 46 to 80 (35 residues), see Phobius details amino acids 96 to 115 (20 residues), see Phobius details PF13493: DUF4118" amino acids 20 to 120 (101 residues), 62.2 bits, see alignment E=7.1e-21 PF07568: HisKA_2" amino acids 142 to 212 (71 residues), 49.9 bits, see alignment E=5.4e-17 PF13581: HATPase_c_2" amino acids 223 to 296 (74 residues), 33.9 bits, see alignment E=5.5e-12 PF02518: HATPase_c" amino acids 239 to 331 (93 residues), 47.4 bits, see alignment E=4.8e-16

Best Hits

KEGG orthology group: None (inferred from 40% identity to mno:Mnod_7690)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8AL95 at UniProt or InterPro

Protein Sequence (334 amino acids)

>AZOBR_RS07855 hypothetical protein (Azospirillum brasilense Sp245)
MENLLLQFLPKDPQSIWVRYGVTAVIIAITTLLRYVLEPILSKYPFLLYIPAIFLVSLLF
DRASGFIAVLLSGGFAAWLFMEPRGDLWIADHGDQLAFMIYVGLGLGIAAITEMLRTTLE
ELCQSWEKLAASDREKDLMLQEIHHRIRNDLQMISAQLTLAAMRPENAQAMMQGTIERIG
VLARIYGRLRRVDGASIVNVKEFLESLVEDLQLGMVGVRPIALSARADSVDLDMNTAVAV
GTIANELVTNAVKYAFPDAQAGWVDLSFRQEADEYVLCVSDNGVGFTSDQPKGTGLGRQI
VQQLALQLRGKLDIQSRTEGGIQAMLRFPVPRPG