Protein Info for AZOBR_RS07820 in Azospirillum brasilense Sp245

Annotation: MarR family transcriptional regulator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 PF12802: MarR_2" amino acids 31 to 90 (60 residues), 40.8 bits, see alignment E=3e-14 PF13463: HTH_27" amino acids 33 to 98 (66 residues), 23.4 bits, see alignment E=8.8e-09 PF01047: MarR" amino acids 33 to 90 (58 residues), 42.9 bits, see alignment E=5.5e-15

Best Hits

KEGG orthology group: None (inferred from 59% identity to xau:Xaut_1989)

Predicted SEED Role

"Transcriptional regulator, MarR family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8AL87 at UniProt or InterPro

Protein Sequence (150 amino acids)

>AZOBR_RS07820 MarR family transcriptional regulator (Azospirillum brasilense Sp245)
MLDESPFGMILIDCARLLRARFDRALDDARLGLTAGEARALVYVCRHPGSRQSVLATHMW
VEPMTLVGFLDRLEARGLVVREPDPADRRAKIVQPTPQAEPLALQVLEAFRTERESAMAD
LSAEEIVLLKDMLGRLRNRMIADDRGGAGQ