Protein Info for AO356_28865 in Pseudomonas fluorescens FW300-N2C3

Annotation: histidine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 464 signal peptide" amino acids 12 to 15 (4 residues), see Phobius details transmembrane" amino acids 16 to 39 (24 residues), see Phobius details amino acids 167 to 195 (29 residues), see Phobius details PF00672: HAMP" amino acids 195 to 245 (51 residues), 30.3 bits, see alignment 6.6e-11 PF00512: HisKA" amino acids 251 to 302 (52 residues), 34.5 bits, see alignment 2.7e-12 PF02518: HATPase_c" amino acids 355 to 445 (91 residues), 63.2 bits, see alignment E=4.6e-21

Best Hits

KEGG orthology group: None (inferred from 87% identity to pba:PSEBR_a2313)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9XGA4 at UniProt or InterPro

Protein Sequence (464 amino acids)

>AO356_28865 histidine kinase (Pseudomonas fluorescens FW300-N2C3)
MRSARSTWLSSLRFKVLLAYIAGVALSILLIVSAALALVSSQSDILSVMNMAERTQELAE
KLQFDAGGRPVGFDPSEADRIWTYDSMGQEIGYRVLDASANVALASTDATFWPASASLHP
LEHEPFKFERQGILMYGATAPVEHDGQTWFLQLAVSERLMDLFHGAFALPFMGAGIVLFS
LVLLFVFGACAYVILGYTLKPLREVSESAAAISPRSLHSRLQVSRVPSEVLPLVDSFNRV
LQRLENGYRIQQEFLATAAHELKTPLALIRAQIELMADSPDRSALLNDVAHMTRQAQQLL
LLTEASEAQNYRFAAVELADVAKEAADYLQRMAEAVDVRLVLADDCTGVAPWQADRSALF
TLLKNLLENALQHAPRGTEVRVDIGKDRLSVRDWGPGVDREQLPQLCVRFWRGPHRRDHG
AGLGLTICQEIAQAHGWTLSATRAEPGLLLQLSRREHASDPARA