Protein Info for AO356_13290 in Pseudomonas fluorescens FW300-N2C3

Annotation: GMC family oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 531 PF00732: GMC_oxred_N" amino acids 79 to 297 (219 residues), 196.7 bits, see alignment E=7e-62 PF05199: GMC_oxred_C" amino acids 382 to 518 (137 residues), 82.8 bits, see alignment E=5.4e-27

Best Hits

KEGG orthology group: None (inferred from 97% identity to pba:PSEBR_a5347)

Predicted SEED Role

"FIG022869: Oxidoreductase, GMC family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WYS4 at UniProt or InterPro

Protein Sequence (531 amino acids)

>AO356_13290 GMC family oxidoreductase (Pseudomonas fluorescens FW300-N2C3)
MPVPDPFREGLARGWTTYNGAQLTEDLTLEADVAIIGSGAGGGTTAEILSAAGYRVLLIE
EGPLKTSHDFKLLEDQAYSSLYQEGLGRMSKDGAITILQGRAVGGTTLINWTSSFRTPDQ
TLDHWAAEHNVKGHGRAEMAPWFAQMEQRLGVAPWLVPPNANNDVIRKGCEQLGYAWHVI
PRNVRGCWNLGYCGMGCPTNAKQSMLVTTIPATLDKGGALLYLARAERLTIKNDAVAGLE
CQAMDERCVAPTGRRITVKARHYVLAGGGINSPGLLLRSAAPDPHERVGKRTFLHLVNMS
AGQFDEVINPFYGAPQSIYSDHFQWQDGTTGKMSYKLEVPPLHPALAATLLGGFGPENAL
HMSRLPHTHAMLALLRDGFHPDSPGGRVELRSDGTPVLDYPVSPYTWDGLRRAFHSMAEI
QFAGGAKAVMPLHSDARYVKTLAEARTLIDGLDLALYRTRLGSAHVMGGCAMGEDPKTAV
TDSLGRHHQLGNLSIHDGSLFPTSIGANPQLSVYGLTAQLATALAERLKNP