Protein Info for AO356_04360 in Pseudomonas fluorescens FW300-N2C3

Annotation: peptidase S9

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 684 PF02897: Peptidase_S9_N" amino acids 16 to 408 (393 residues), 270.6 bits, see alignment E=2.2e-84 PF00326: Peptidase_S9" amino acids 467 to 682 (216 residues), 236.6 bits, see alignment E=2.2e-74

Best Hits

KEGG orthology group: K01354, oligopeptidase B [EC: 3.4.21.83] (inferred from 97% identity to pba:PSEBR_a1379)

Predicted SEED Role

"Protease II (EC 3.4.21.83)" (EC 3.4.21.83)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.21.83

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9W4B3 at UniProt or InterPro

Protein Sequence (684 amino acids)

>AO356_04360 peptidase S9 (Pseudomonas fluorescens FW300-N2C3)
MSLSAHVSNAPIARRDAGVDPYAWLQERDTDAVLDYLKAENSYQEAQLADQAELRETLFQ
EIKGRILETDLSLPSPWGPYLYYTRTTAGDEYPRHYRCPRPADDSLSVDESHEQLLLDPN
ALAGGEFFALGAFSISPDHQRLAYSLDTTGDEIYTLFVKELSNDKISELSFDNCDGSMTW
ANDSLTLFFGELDDTHRPHKLWRYRLDGTAAEEVFHEPDGRFFLHCYRSSSEKQLILSLG
SKTTSEVWVLDAAQPQQPFTCLAPRLENHEYDVDHGLLDGQWTWLIRSNRDGINFALYQA
ADTGVAPTEADWQNLIPHSDTVMIDGLSLNARAMTLSLREGGLPIIEVHPQDLPAYRVQL
PDAAYSLHVQNSLEFVSDRIRLRYEALNRPAQIRQLDLASGEQVVLKQTPVLGPFDADAY
VSQRLWATAPDGTQVPISLVVKREALGRPVPLYLYGYGAYGESLDPWFSHARLSLLDRGV
AFAIAHVRGGGELGEAWYRAGKQEHKHNTFGDFIACAEHLIANGFTTAEQLAISGGSAGG
LLIGAVLNQRPELFKVAIAEVPFVDVLNTMLDPDLPLTVTEYDEWGNPEEPDVYDRIRAY
APYENVRAQAYPALLVIAGYNDSRVQYWEAAKWVAKLRATKTDDNPLLLKTELGAGHGGM
SGRYQGLRDVALEYAFVLKVLGLG