Protein Info for AO353_23120 in Pseudomonas fluorescens FW300-N2E3

Annotation: 3-phenylpropionate dioxygenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 344 PF00355: Rieske" amino acids 22 to 100 (79 residues), 75.8 bits, see alignment E=2e-25 PF19112: VanA_C" amino acids 159 to 333 (175 residues), 61.5 bits, see alignment E=1.2e-20

Best Hits

KEGG orthology group: None (inferred from 79% identity to pae:PA3500)

Predicted SEED Role

"Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)" in subsystem Phenylpropanoid compound degradation (EC 1.14.13.82)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.14.13.82

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9VYT8 at UniProt or InterPro

Protein Sequence (344 amino acids)

>AO353_23120 3-phenylpropionate dioxygenase (Pseudomonas fluorescens FW300-N2E3)
MTMNTTVDPAENLLANGLKNLWFPVLPSDQLGEKPVSIRRLGYKIALWRDNDGSVHALED
HCPHRGAPLSQGPVLGDRLQCPYHGVEVRCDGTVTKVPGSPGCKLEGSRPTRMFHTREAA
GAIFLYNAAEPHVDTPPELVLPEQLTSPEWSSFVCYTEWKGDYRYVIDNVMDPMHGTYLH
KMSHSMSEGEATAKFVTRDTDNGFFFEKEGQRGVNFDWTEFMDNGCHWLRLEIPYPKTGG
PGGNFTIIGSYTPSSRSLSAVFHWRCRPLTGWQRDTWRFLYRNRLEARHWAVLEQDRVLL
EFMEPDANQRENLYQHDLGVVRLRRYLKNAAKAQLELIDAKQLP