Protein Info for AO353_14560 in Pseudomonas fluorescens FW300-N2E3

Annotation: mammalian cell entry protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 767 transmembrane" amino acids 12 to 34 (23 residues), see Phobius details PF02470: MlaD" amino acids 41 to 134 (94 residues), 55.7 bits, see alignment E=2.5e-19 amino acids 157 to 226 (70 residues), 44.4 bits, see alignment E=8.3e-16 amino acids 280 to 371 (92 residues), 52.2 bits, see alignment E=3e-18 amino acids 396 to 457 (62 residues), 38.5 bits, see alignment 5.7e-14 amino acids 521 to 608 (88 residues), 50.6 bits, see alignment E=9.3e-18 amino acids 636 to 694 (59 residues), 35.2 bits, see alignment 6e-13

Best Hits

KEGG orthology group: None (inferred from 92% identity to pfo:Pfl01_4780)

Predicted SEED Role

"Paraquat-inducible protein B" in subsystem Oxidative stress

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WVS2 at UniProt or InterPro

Protein Sequence (767 amino acids)

>AO353_14560 mammalian cell entry protein (Pseudomonas fluorescens FW300-N2E3)
MTDLPKAKTRPASNWSAIWVLPLIALMIGGWLGWRAYNETGIEVQVRFESGEGIQVNKTE
VVYKGMPVGKVKSLALDDEGKTRGVIATIEMNKDVEQYLKTSTRFWLVKPSVTLAGITGL
ETLVSGNYVAISPGEGEPSRKFTALTKEPPLSDSKPGLHLTIKADRLGSLNRGSPVFYKQ
IQVGQVKSYLLSEDQSTVEIKVFIEPTYANLVRKHTRFWNASGISIDANLSGVKVRSESL
ASIVAGGIAFATPDNRKDSPPTDPSLPFRLYEDFDAAQAGIRVKVKLSDFEGLQAGRTPV
MYKGIQVGNLKALKIDPDLSSATAELTLDPLAEDYLVTGTQFWVVKPSISLAGITGLEAL
VKGNYIAVRPGDKGGAPQREFEARPKPPPLDLRSPGLHLVLFTENLGSLEVGSPILYKQV
KVGSVQSYQFSRTKKQLVIGVHIEKEYEGLVNASTRFWNASGITLTGGLTGGIQVKSESL
QSLMAGGIAFETPKATAPLQKRIPRFRLFANRDEASQKGAVVTIKVDRADGLRTGTPIRF
KGLDVGKVESVDLSDDLQSVLLTARITEVPERIARVGSQFWVVKPELGLIKTSNLETLVS
GQYIEVQPAAKNLGPQKNFVALANPPESVKEEAGLSLVLSAARRGSLKTGVPVTYREITV
GKVTGYELGQTADRVLVHILIEPKYAPLVRSGTRFWNTSGFGLDFGLFKGATVRTESLET
LIQGGIAFATPEGDRMGSPARPEQTFPLFDKFEDEWLSWAPKISLGK