Protein Info for AO353_04745 in Pseudomonas fluorescens FW300-N2E3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1601 transmembrane" amino acids 276 to 297 (22 residues), see Phobius details amino acids 440 to 462 (23 residues), see Phobius details PF20178: DUF6543" amino acids 89 to 350 (262 residues), 160 bits, see alignment E=2.2e-50 PF13855: LRR_8" amino acids 1070 to 1128 (59 residues), 31.5 bits, see alignment (E = 3.1e-11) PF14496: NEL" amino acids 1261 to 1487 (227 residues), 160.8 bits, see alignment E=9.1e-51

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9VR14 at UniProt or InterPro

Protein Sequence (1601 amino acids)

>AO353_04745 hypothetical protein (Pseudomonas fluorescens FW300-N2E3)
MSDAYIHLATPHMFSHTINNKNTHLGLIISSIPEWLSSASMEKRDSLNNSQFIIADEYKA
APFTQRSSLKKAVEESWKSQNKLDRMFETLQDINSFAEPLLKTALKNHYGLELDVKKTYL
RLYIPSTIPWFPIKTGAARTRTVSLLAAALHNFEAFETQPQAYEPDSCFITEPSPSGQFD
ILPLCHRIKVHEFIALCRTLDIGAQYKKHLESFLLPGDGLAKAVLQLNVIDSQKAAFNAA
AHLALLEKDITAKAHRQLIGLIDGHKGLVLEGQTLLPHTLTMLDTPLTGIVLIVPMLAHR
QGAHRVIAYVPDDPEHPVKEYPDSGAFLLELTRQMRSPIYQQFFSRFVAHEQRGDFFSKL
NDQLTRIMWHPPASLDPRPTWRETSVERPHLRLDTTVIRDELWAFLFQEKLNKILNDARV
IAVPTDDEDRKTRWDRLDRLLSVASTILNIAAFVAIPFVPFLGELMLAYTAYQLLDQTFE
GIIDWAEGETTEAFEHLMGVVESVVQLGVLAAGGQFVSTALSVKPSAFVDSLIVIQKTDG
GTRLWKPDLAPYEHKVPLPKGSQPNEQGVHGHEGQDVLRLGGKHYGVTKDPDTNQFRILH
SSRPEAYRPRLKHNDKGAWVHEAEQPRTWQGTILMRRLGHTVDEFTDAELEHIRLVSGID
EGALRRLHVDLESPADLLNDTIQRFKFYNEANKELANTPREPLEEGLQERFKRLYDNQQR
SNDARVQLLQNDFPDLATSTAQKVLSCASTTELQQMTAKAKVPLRLKQVLRELQFETRIS
RVYEGLYLSELASADTETMVFNTLRLQPGWSGNVRIDIREHSFNGALRSSIGAPNAPEHK
VLIWRADGRYEARDAQGHHLNGASDLFESILRALPDTERNALGYNIGQGQTLRQTLTLKP
LPRSELRAVLAEPPLRKTSERETMRLLQGPGYSRIRQPTRGATQSLEDRVQQLYPTFSTD
EITAFARSSGTQEQAHQTLNRLELEFEELINDLSAWLQSSTEARTGTVEARNESTGRQTF
ARALKLCWQRATDVLADDEGNWLGHHLVLQDLPLNTILRSLPELKADFSHVALLDLSNTG
FSASEAHFLKKFPALRSLLLRNNHLTTIPPAIFDMPHLRGLALSNNQIALTPQAVAQLRE
LIHLERLALMNNPLGHVPDVSRMPRLQGLYLGNTGIETWPVGVFGQPRPRNFYLDLQNNR
LSTIPEVAPGSPRAEILARTLLSRDQLSAENIQHIEAYIESVGLDPSRSYPSRGELDSHY
WLDDLPSEQRAQKQKNWDALEDELGSEPFFNEIRKLTESVDYTSTFKKDLTQKVWRMLDA
AVDDTPLREKLFEMATAPTTCVDAGAQLFNSMGVEVLIHEAYALANKDLVEAELLEIAKG
KSRLNDLSKIARSTVREREANGETFRTEDGEGNVTGTIDEVEVHLAYMTDLADRLDLPWQ
SRGMNFREIASVTPAMIESAYERVLALEQGDLLRDSIIDQDFWVRHITGANRRLFKDFGR
QINWLIELQTVQKRWVHVRNLPFEERHTLKETLKVLTAQLDKTDGEVFTGQEMKTEDFDR
DFNAIVENRNALLKQLTQEAMDRVRLQRAEKVSVGEMDSSR