Protein Info for ABZR87_RS22065 in Ralstonia sp. UNC404CL21Col

Annotation: flagellar protein export ATPase FliI

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 478 TIGR01026: ATPase, FliI/YscN family" amino acids 20 to 476 (457 residues), 569.2 bits, see alignment E=5.5e-175 TIGR03496: flagellar protein export ATPase FliI" amino acids 39 to 474 (436 residues), 645.2 bits, see alignment E=4.1e-198 PF02874: ATP-synt_ab_N" amino acids 42 to 101 (60 residues), 20.2 bits, see alignment E=1.1e-07 PF00006: ATP-synt_ab" amino acids 182 to 397 (216 residues), 287 bits, see alignment E=1.4e-89 PF18269: T3SS_ATPase_C" amino acids 404 to 474 (71 residues), 90.6 bits, see alignment E=7.1e-30

Best Hits

Swiss-Prot: 65% identical to FLII_SALTY: Flagellum-specific ATP synthase (fliI) from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

KEGG orthology group: K02412, flagellum-specific ATP synthase [EC: 3.6.3.14] (inferred from 94% identity to rpf:Rpic12D_3651)

Predicted SEED Role

"Flagellum-specific ATP synthase FliI" in subsystem Flagellar motility or Flagellum

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.14

Use Curated BLAST to search for 3.6.3.14

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (478 amino acids)

>ABZR87_RS22065 flagellar protein export ATPase FliI (Ralstonia sp. UNC404CL21Col)
MSPETVQPAANNPNLRVWQAHLQQTAQRARLARPVVTCGKLTRVAGLVMEAVGLKLPVGS
ACRVELPHGRHVLAEVVGFAEERAFLMPQTDLVGVVPGARVFPLEPQRLPVSSEDGADPT
ISHSKFLPVGPRLLGRVVDANGEPLDGKGPLGAHEDLAWGTLNPAPLNPLKRKPIEHVLD
VGVRAINGLLTVGQGQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFI
DEILGDEGLARSAVVAAPADTSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMA
QREIALAIGEPPATKGYPPSAFAKLPALVERAGNGMVDANGRGGSITAFYTVLAEGDDQQ
DPIADAARAILDGHFVLSRKLAEQGHYPAIDIEQSISRVMSAIVPREQLDTARRFKQLYA
RYQRNRDLIAVGAYARGSDPVTDQAIARYPDMEAFLQQGMFENESREHTLEKMQGVLA