Protein Info for ABZR87_RS20535 in Ralstonia sp. UNC404CL21Col

Annotation: elongation factor G

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 TIGR00484: translation elongation factor G" amino acids 1 to 699 (699 residues), 1207.5 bits, see alignment E=0 PF00009: GTP_EFTU" amino acids 9 to 288 (280 residues), 214.7 bits, see alignment E=2.2e-67 TIGR00231: small GTP-binding protein domain" amino acids 9 to 187 (179 residues), 117.9 bits, see alignment E=3.9e-38 PF03144: GTP_EFTU_D2" amino acids 329 to 396 (68 residues), 71.7 bits, see alignment E=1.3e-23 PF14492: EFG_III" amino acids 409 to 483 (75 residues), 120.3 bits, see alignment E=7.2e-39 PF03764: EFG_IV" amino acids 484 to 602 (119 residues), 164.3 bits, see alignment E=2.5e-52 PF00679: EFG_C" amino acids 606 to 692 (87 residues), 104.4 bits, see alignment E=6.7e-34

Best Hits

Swiss-Prot: 92% identical to EFG2_RALSO: Elongation factor G 2 (fusB) from Ralstonia solanacearum (strain GMI1000)

KEGG orthology group: K02355, elongation factor G (inferred from 85% identity to bch:Bcen2424_2528)

Predicted SEED Role

"Translation elongation factor G" in subsystem Translation elongation factor G family or Universal GTPases

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (700 amino acids)

>ABZR87_RS20535 elongation factor G (Ralstonia sp. UNC404CL21Col)
MPRQTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG
ITITSAATHCMWRGMAGDRPEYRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQ
PQSETVWRQANKYKVPRIAFVNKMDRIGADFFRVERQMRDRLKGNPVPIQIPVGAEDGFR
GVVDLVKMKAIVWDDASQGVKFEYTDIPEELKATAQEWHDKMVEAAAEADEALLDKYLGG
ETLSEAEIKRALRQRTIAGEIVPMLCGSAFKNKGVQAMLDAVVDYLPSPVDIPSIQGHGE
KDEPLERHASDTEPFAALAFKIMTDPFVGQLAFFRVYSGKINSGDTVYNSVKGKRERLGR
ILQMHANQREEIKEVLAGDIAAAVGLKDVTTGETLCDPEHVIVLERMEFPEPVISQAVEP
KTKADQEKMGIALNRLAQEDPSFRVKTDEESGQTIISGMGELHLEILVDRMKREFGVEAT
VGKPQVAYRETIKKAAEDVEGKFVKQSGGRGQYGHAVITLEPNDGKGYEFVDEIKGGVIP
REFIPAVDKGIRDTLNTGVLAGYPVVDVKVRLTFGSYHDVDSNENAFRMAGSMAFKEAMR
KAGPILLEPMMAVEVETPEDYMGNVIGDLSSRRGMVQGTEDIPGGGGKVVHAEVPLAEMF
GYSTNLRSLSQGRATYTMEFKHYAEAPRNVSEAVMAAKKV