Protein Info for ABZR87_RS19235 in Ralstonia sp. UNC404CL21Col

Annotation: ATP-binding cassette domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 247 PF00005: ABC_tran" amino acids 31 to 172 (142 residues), 110.6 bits, see alignment E=9.4e-36

Best Hits

KEGG orthology group: K02017, molybdate transport system ATP-binding protein [EC: 3.6.3.29] (inferred from 97% identity to rpf:Rpic12D_4331)

Predicted SEED Role

"Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)" in subsystem Molybdenum cofactor biosynthesis or Transport of Molybdenum (TC 3.A.1.8.1)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.6.3.29

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (247 amino acids)

>ABZR87_RS19235 ATP-binding cassette domain-containing protein (Ralstonia sp. UNC404CL21Col)
MSGGMIDLVVQKTLASAARVFSLDIAVRSDSRRVVLYGPSGAGKSLTLRAIAGLMTPERG
RIVLNGRTLFDHADGINLSAQERRVGYLFQDYALFNHLTVAQNIAFGLKRGWFNPPRRTH
DPRVQQWIDTFELGAVAANFPTQISGGQRQRVALARALIAEPSMLLLDEPFAALDPALRT
RMRSELSALQARLQVPMLMITHDPADVEMFGDHVFELRDGRVVADAVRAPDAPPLSPYPH
LTAVVNR