Protein Info for ABZR87_RS02065 in Ralstonia sp. UNC404CL21Col

Annotation: M20 aminoacylase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 395 TIGR01891: amidohydrolase" amino acids 16 to 380 (365 residues), 378.6 bits, see alignment E=1.6e-117 PF01546: Peptidase_M20" amino acids 72 to 390 (319 residues), 167.8 bits, see alignment E=3.2e-53 PF07687: M20_dimer" amino acids 184 to 277 (94 residues), 40.5 bits, see alignment E=2.4e-14

Best Hits

Swiss-Prot: 46% identical to HIPO_CAMJE: Hippurate hydrolase (hipO) from Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)

KEGG orthology group: K01451, hippurate hydrolase [EC: 3.5.1.32] (inferred from 99% identity to rpi:Rpic_3113)

MetaCyc: 39% identical to N-acetyl amino acid acetylase (Bacillus subtilis subtilis 168)
3.5.1.-

Predicted SEED Role

"Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A" in subsystem p-Aminobenzoyl-Glutamate Utilization

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.5.1.32

Use Curated BLAST to search for 3.5.1.32

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (395 amino acids)

>ABZR87_RS02065 M20 aminoacylase family protein (Ralstonia sp. UNC404CL21Col)
MKLIPEIQAAQPEIQALRRDIHAHPELCFEEQRTSDLVAAKLAEWGIEVHRGLGKTGLVG
VIRNGEGKSIGLRADMDALPLAEANQFEHRSKHDGKMHACGHDGHTAMLLGAAHYLAKHR
NFSGTVNLIFQPAEEGGGGAREMIKDGLFDRFPCDAVFGLHNWPGVPVGAFGTRAGALMA
SSNEFRITIKGKGAHAALPHNGNDPVFVGAQVVSALQGIITRNKRPIDTAVLSVTQFHAG
DATNIIPNEAWIGGTVRTFSTEVLDLIERRMEEVSKGIASAYDCTVDFVFHRNYPPTVNT
EAETQFAAAVMRELVGVDNVDANIDPTMGAEDFSFMLIEKPGCFAFIGNGDGDHREQGHG
LGPCMLHNPSYDFNDELLPLGATYWVRLVEKFLAT