Protein Info for ABZR86_RS18115 in Dyella japonica UNC79MFTsu3.2

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 397 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details transmembrane" amino acids 46 to 67 (22 residues), see Phobius details amino acids 76 to 98 (23 residues), see Phobius details amino acids 104 to 125 (22 residues), see Phobius details amino acids 135 to 157 (23 residues), see Phobius details amino acids 165 to 185 (21 residues), see Phobius details amino acids 206 to 230 (25 residues), see Phobius details amino acids 240 to 260 (21 residues), see Phobius details amino acids 269 to 289 (21 residues), see Phobius details amino acids 295 to 314 (20 residues), see Phobius details amino acids 333 to 353 (21 residues), see Phobius details amino acids 359 to 380 (22 residues), see Phobius details PF07690: MFS_1" amino acids 14 to 324 (311 residues), 152.2 bits, see alignment E=2.7e-48 PF06779: MFS_4" amino acids 18 to 376 (359 residues), 35.1 bits, see alignment E=1.5e-12 PF00083: Sugar_tr" amino acids 45 to 181 (137 residues), 25.4 bits, see alignment E=1e-09

Best Hits

Swiss-Prot: 37% identical to YFHI_BACSU: Uncharacterized MFS-type transporter YfhI (yfhI) from Bacillus subtilis (strain 168)

KEGG orthology group: K08156, MFS transporter, DHA1 family, arabinose polymer transporter (inferred from 64% identity to bur:Bcep18194_A6019)

Predicted SEED Role

"Arabinose efflux permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2J626 at UniProt or InterPro

Protein Sequence (397 amino acids)

>ABZR86_RS18115 MFS transporter (Dyella japonica UNC79MFTsu3.2)
MTSPDHSRAALLALAVAAFAIGTTEFVIMGLLPEVAADLKVSIPSAGLLVSGYALGVAAG
APLLAALTARMERRNALLALLGLFIAGNALCAVAPNYAVLMLARVVAAFCHGSFFGIGAV
VAAHVVPRGQGARAIALMFAGLTLANVLGVPFGTFLGQWAGWRSTFGAVTVLGAVAALGV
WRLVPPLPELHAPDMRREMAVLRQPQVLLALAMTVLGFGGVFTVFTYIAPILQTQSHVSV
GATGWVLVLFGAGTTLGNLLGGRLADWRLMPSLVAILVALTLILVGFTWTMHGTVAAIAT
VFVWGVAAFATVPPLQMRVVQQAVEGPHLASTLNIAAFNLGNAIGAFIGGAVIDRGPGLP
ALGLAGAAVTALGLLVTVWSMALERRRATSAVCTANA