Protein Info for ABZR86_RS11040 in Dyella japonica UNC79MFTsu3.2

Annotation: beta-phosphoglucomutase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1036 PF03636: Glyco_hydro_65N" amino acids 35 to 286 (252 residues), 162 bits, see alignment E=4.9e-51 PF03632: Glyco_hydro_65m" amino acids 346 to 712 (367 residues), 360.8 bits, see alignment E=2.1e-111 PF03633: Glyco_hydro_65C" amino acids 723 to 782 (60 residues), 57.8 bits, see alignment 1.8e-19 TIGR01990: beta-phosphoglucomutase" amino acids 807 to 993 (187 residues), 226.6 bits, see alignment E=4.9e-71 PF00702: Hydrolase" amino acids 808 to 986 (179 residues), 90.7 bits, see alignment E=4.1e-29 TIGR02009: beta-phosphoglucomutase family hydrolase" amino acids 808 to 992 (185 residues), 189.2 bits, see alignment E=1.7e-59 PF13419: HAD_2" amino acids 810 to 991 (182 residues), 67.8 bits, see alignment E=3.5e-22 TIGR01509: HAD hydrolase, family IA, variant 3" amino acids 894 to 992 (99 residues), 62 bits, see alignment E=1.5e-20

Best Hits

Predicted SEED Role

"Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64)" in subsystem Maltose and Maltodextrin Utilization or Trehalose Biosynthesis or Trehalose Uptake and Utilization (EC 2.4.1.64, EC 2.4.1.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.4.1.64, 2.4.1.8

Use Curated BLAST to search for 2.4.1.64 or 2.4.1.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2F990 at UniProt or InterPro

Protein Sequence (1036 amino acids)

>ABZR86_RS11040 beta-phosphoglucomutase (Dyella japonica UNC79MFTsu3.2)
MLDRLASAPAAAVDVVPTSGVGTGMTDPWTLIRRGTDPAGFAQDESLFALANGALGVRGG
LEEGDSPSQASFLSAAWERTPIEYHERFPGFAAHTDTRIPVADATRIQLRLGDVPVRLAE
GEWLDFERRLDLREGCYRRFLRWRSPAGETLEIEAERIVSLDEPGLLALRYRVRSVDYTG
PVTLESAISTARDAAEQGDDPRIGTRLDGGLHTVDAAAEPDFAWVRQQTTHSGIRLACAQ
AHRAQDGGLDCHFANLAQHGVVHSYTGMLTPGQAVTLEKYVAYAWTEPHGDDADDALLAR
TRGILEAAAHLRYAGLLERQRQALAPLWDGADLAIDGDAATEQALRFNLFHLFQSSCRDG
QGSAAAKGLTGEGYEGHYFWDAEAFILPVLATVAPELARGMLLYRHRILDRSRRHARELN
HPRGALYAWRTISGDECSAYYPGGSAQYHINAAIAWAISLYVDASGDTDFLRDHGAEILF
ETARVWLDIGHFNARRGDAFCIHEVTGPDEYSALVDNNHYTNRMAQRHLRDAAATALWMA
GAAPVEYGALCARIGLGEDEVAQWRRAAEAMYLPEDPRLGVFPQDDGFLDRPRLPDHLAA
KPGDGKHPLLLRLHPLTIYRHQVCKQADTLLALMLAGDGVERAAKRRNFDYYESVTVHDS
TLSASTFGVIAAEVGLAAKAWRYFQDSLRVDLDDSHGNAAHGVHMAAMAGSWLGLVWGFG
GFRTIDGQPALAPRLPAAWHGYRFGLRWGRAQLRVEVDASGVRYTLLRGDTLAFRHDGRE
HTIHAGQTLRLPRADAIPNRRAPQPALQAVIFDLDGVIADTAVVHDAAWRRLAQETGLPF
DASIGERLKGVDRMGSLDILLERAGRAYSAEEKLALGERKNDYYREQIQRFGPDQLLPGA
RAAIAAVRAAGLKVGLASASRNAPLLLERLGVAHLFDYIVDAAHIQRSKPDPEIFLAAAA
GLGVAPAACLGVEDAAAGVASIHAAGMAAVGIGQPSALAQAETVLPGLSAFRIEDFISSE
EASRAASGEAASDIAT