Protein Info for ABZR86_RS08570 in Dyella japonica UNC79MFTsu3.2

Annotation: 3-hydroxybutyrate oligomer hydrolase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 611 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF10605: 3HBOH" amino acids 26 to 588 (563 residues), 407.3 bits, see alignment E=6.1e-126

Best Hits

Predicted SEED Role

"D(-)-3-hydroxybutyrate oligomer hydrolase (EC 3.1.1.22)" in subsystem Polyhydroxybutyrate metabolism (EC 3.1.1.22)

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.1.1.22

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2DLV2 at UniProt or InterPro

Protein Sequence (611 amino acids)

>ABZR86_RS08570 3-hydroxybutyrate oligomer hydrolase family protein (Dyella japonica UNC79MFTsu3.2)
MTILHRSWLLLVPLLAACAAQPPSSHRSGQGFMRDPDFIQGDVRITGHRGSDDLLSAGLG
LAGLAGTPAPYADALHPTAGELRRRAIQNSWKGIADLGPLGGYGRVYGAVPAVPGREYQA
FARIPGAHAPHRVLLQLPDGFDTQRRCLVVTASSGSRGIYGAIALAGAWGLPRGCAVAYT
DKGTGAGYFDPADDSGVQLDGTRAKRGSAPLEFEPVPAAADAGVAIKHLHSGDHPEADWG
RHVLQAARFGLAMLDRAYPEQAPFTAQNTRIIATGLSNGGGAVLQAAGLDDEGVLAGVVA
LEPNVHVEGHGRALYDYATDAALWLPCALSDARFDRTPLARGKDGKPPAAWLARCASLRE
LGLVGGDTPQAQAAQAYEHLRKGGWTDDALNVAASTQAFDLWRAIAAGYASSYLRRGATD
MPCGFRYAATADASPAVRASWWADGAGIPPGNGIALLGGTDATADPALPGTRCLRALWDG
TGAEVAGLHASVAATSVRLPRPELPLWVLHGAEDGLLPTAFTSEPYVAWLHAQGRHPLYW
KVPHAQHFDAFLPLPGFGERHVPLLPYGYLALDRLWSHLYAAAPWPRDNPPVPAARPRGA
GAMERAALGLP