Protein Info for ABZR86_RS00290 in Dyella japonica UNC79MFTsu3.2

Annotation: CocE/NonD family hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 645 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details TIGR00976: hydrolase CocE/NonD family protein" amino acids 58 to 644 (587 residues), 260.7 bits, see alignment E=1.8e-81 PF02129: Peptidase_S15" amino acids 61 to 347 (287 residues), 237.2 bits, see alignment E=2.8e-74 PF08530: PepX_C" amino acids 389 to 622 (234 residues), 99.4 bits, see alignment E=3.1e-32

Best Hits

KEGG orthology group: K06978, (no description) (inferred from 74% identity to xcb:XC_1881)

Predicted SEED Role

"Glutaryl-7-ACA acylase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2CA75 at UniProt or InterPro

Protein Sequence (645 amino acids)

>ABZR86_RS00290 CocE/NonD family hydrolase (Dyella japonica UNC79MFTsu3.2)
MPMSRSLSGTSILAAALVAVLGASLAQAQTAPLTPDIPAKFESPTAGFDYVKREVMIPMR
DGVKLHTVIVIPRGAKHAPILLTRTPYNASGRAARLESPSMLAELPQGDEVFVRGGYIRV
FQDVRGKYGSEGEYVMTRPLRGPLNASEVDHSTDAYDTIDWLVKNIPESNGKVGMLGSSY
EGFTVVMALINPHPALKVAAPESPMVDGWMGDDWFHYGAYRQTNFDYIRGQTAQKGKGSS
APRDGYDDYSNFLDAGSAGDYARANGFEQLPFWKKLDEHPAYDAFWQGQALDRIMAQQPL
KVPTMWLQGLWDQEDMWGAIHSYAATEPKDKGNDKNFLVMGPWRHSQVNYDGTSLGPLKW
DGDTALQFRRDVLKPFFDQYLVDGAPKANTPPVLIYNTGENRWDRFKSWPLSCDSGCASK
PKALYLEADGKLSFNAPADSASKYDEYVSDPAKPVPYLPRPVHFADHDAWTRWLVTDQRF
VDGRPDVLTYVSEPLTAPLHVGGAPQVNLYASTSGTDSDWAVKLIDVYPDTIASDPDMGG
YELPISLDIFRGRYRTSFEHPQAIAADQPLLYRFGLPTVNHVFQPGHRIMVQVQSTLFPL
YDRNPQTFVPNIFDAKPGDYRKATQRVWHAPGTLSAISLPVVSGK