Protein Info for ABIE53_006331 in Paraburkholderia graminis OAS925

Annotation: ACS family D-galactonate transporter-like MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 374 transmembrane" amino acids 6 to 25 (20 residues), see Phobius details amino acids 32 to 54 (23 residues), see Phobius details amino acids 58 to 79 (22 residues), see Phobius details amino acids 91 to 114 (24 residues), see Phobius details amino acids 121 to 140 (20 residues), see Phobius details amino acids 161 to 185 (25 residues), see Phobius details amino acids 209 to 230 (22 residues), see Phobius details amino acids 242 to 264 (23 residues), see Phobius details amino acids 270 to 290 (21 residues), see Phobius details amino acids 303 to 328 (26 residues), see Phobius details amino acids 336 to 356 (21 residues), see Phobius details PF07690: MFS_1" amino acids 4 to 317 (314 residues), 154.8 bits, see alignment E=1.4e-49

Best Hits

KEGG orthology group: None (inferred from 60% identity to hba:Hbal_2607)

Predicted SEED Role

"FIG00457488: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (374 amino acids)

>ABIE53_006331 ACS family D-galactonate transporter-like MFS transporter (Paraburkholderia graminis OAS925)
MDRGWINAAFFWSYGAFQIPMGWVADRYGVKWPYAISFALWCVATAMMGAVTALASLVVM
RLVIGMAEAIVIPASYRWIRNNFDESQNGLAVGLLAMGNKFGPALGAPVGAWFIVHYSWQ
VMFVATGLVGLIWLAPWLLLARNDLPDKAQLAAANRRARMVSLGSIVSSPVVWGGLITNF
CYGYFTFYCMTWMPAYLVEQRHLSLSKSGLFTFFSFAGIAIVAALAGWAADRIIARGHNA
ILVRKVFTITGFVGGCTVLLGAYAQTLDMALFWNVLSLSLLGLVTANNLVLSRLSLIPKQ
AIGLVTGVQQVATSLAGGVTASLSGWLLHVSGSYDLPMMVILVFLAIGALATAILYRPEW
APKVTEMQPALREA