Protein Info for ABIE53_002487 in Paraburkholderia graminis OAS925
Annotation: regulator of PEP synthase PpsR (kinase-PPPase family)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 99% identical to PSRP_PARPJ: Putative phosphoenolpyruvate synthase regulatory protein (Bphyt_2439) from Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN)
KEGG orthology group: K09773, hypothetical protein (inferred from 99% identity to bug:BC1001_2148)Predicted SEED Role
"FIG137360: hypothetical protein"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (280 amino acids)
>ABIE53_002487 regulator of PEP synthase PpsR (kinase-PPPase family) (Paraburkholderia graminis OAS925) MPLTFPAPLMPPTVFIVSDGTGITAETFAHSILSQFDQKFRLVRVPFVDSTEKAYATLEK INEAVQQDGRRPIVFTTLVDSASNQIVKGSNALVLDMFQTFVEPLEQELELKSSHAMGRG HQNADTEEYKNRIEAINFSLAHDDGQSNRNLADADVILVGVSRSGKTPTSLYLAMQYGVK AANYPLIPEDFERGKLPTPLLAHRQKMFGLSIDPQRLSEIRNERRPGSKYAAPENCRYEI NEAEAMMRREGIKWLSSTHKSIEEIATTILQEIKLDRPSY