Protein Info for ABIE53_002469 in Paraburkholderia graminis OAS925
Annotation: filamentous hemagglutinin
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
"Large exoproteins involved in heme utilization or adhesion"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (3892 amino acids)
>ABIE53_002469 filamentous hemagglutinin (Paraburkholderia graminis OAS925) MRVWTRNALRLLEQNRHVHDERHERSVQSAHQRWSVLTPARVYRVYGLWQRAVSALVALT LFAGPLSITFEQSRDAAGVLAAGSTRLDDEAWQQIQDLAGLRVHFTMQEAQAAPIVDPTA PISFQPKITQSTGANGGVPVVNITAPNAAGISLNQYQSFNIDPVGLILNNSLMFGTSLTG GDVQANPNLSGRTASVIVNQVTSTGAAFASLLNGPLEVFGAPATVIIANPNGITTHGTGF TNTIGVTLSTGTPQFLSDLKGSVTDFNNAQAIGYSVTGGHIQIEGNAGVNGPGAGIEGTV GTIDLIGETIGINAPLYAGQRINAIAGRQFVLPSAVTASGTTYATSSNGADNTANAINNA NGRANNGLAIDATAFGAMTAGQIQVIGTAAGMGVRTDAQMAANTGDLLLSSNGDLTVNGS AAQQQATLQASGNVSMTGAHVGVTGYTINANGDVTSSGTIQSGGKLAVSAGGNVNVANTQ SSGDAAIKGGANVTLGDVQTGGALSVSAQGNDGAGDINLNGTSVVSGATNLQAARDINVN GQANGGTLQATAQRNVNVNAALQTSGDLALSATQGNLNAGATVKSGNNLALTSGQNTIVT GQATAQNAVTVAAGEDLSVSGSLASGTTLAANVARDVSVPGSLLVGTNAQVNAGRNVDVP GVVIVQQDGVINAQNNMTGGGSVAFGQNGTLATGQDVAFAGKLLANGLQVTAGNNASVAD VQAGGAFSIAANGSTSNPAGGGDVSFNGNAAAVGATTVQAARDVIVNGTLAGGSQVALTA QRNVTVATSGTVQAVGDLAVAAVSGSVSSSGTVNGAANLSVSGVQDVALTGATSVTGDTT LTAGHDVVIGGTLAGQGAATLNAGHDVIAGGSSGFVKDASVTAANDLAVTGALQGAAVSL TAGRSVALNNVQANNALQVTATGGTLAVNGLVASLSTASLSSGGDTSINGALQSANALSV TSGGNTSIAGSVASNGNVTLANAAGSLTSTGNIQSGDNLLINAAQSVDLGRQGTSALGDL TVNAGQNLTTNGSVVAQGNGTLTAGGTIAGAATAAFGLAANVSSGGDTDLTGSLRGGSVQ TTAGGSASLHDVQAASGLALASSNDLTITGAVTGGAAVALNAGQNIVISGSIQSANDTTL SARSGSLSSTGTIASNGALSAQAGSDINLGGTTSAALDTTLSATRDINVTGMLAGQGQGG VTAGRDIGGAGTMTFAQAATLDAGRDVAQGGLIQGQSVQVTAAGNIGVNNVESASTVVLT ANGTNTVNGPGNVTVNGSVAAAGAVTATARNDVSVVSTGKIASGTTVNVNAQHDIDIAGA VESVGDTALAAQGSLNATGGINSGGKLNIATGLDLSLGASTSAVGDATLNAGRDALLNGL LIGEANGSVTAGRDIGGAGTQAFTQAATYTAQRDIALTGGVQANVINATGGNNAALHDAH SASTLTLSANGNAGGGDAAITGTATAPGTVTLSGARDVLVSGSLTTGDSLTLAALRDVSA SGTLQTTAGDLSATAATGSIALTGTTTTSGALNLSSTLNTQLGGQINAAKDVTVQAGRDI TLSGSLAGQLGGTLNASNDIAGAGTAAFAQAATLNASHDLALTGALQGANVTVTGGNNAG LGSVQAVTGNVDVTANGNAGGGDVTIGGAVTALGALAVQAARDVSVSGAINTGGTTTIDA THNIALADVNSAGNLALTATNGNASAANLTTQGNLTGRSGQALSISGATTVGGNAQLASG GDMTLTGGIGAQNAGTLTAGGSISAASVAFGQQATLNAGGSIGVTGAVATNGALSATAGN DLSMGSAQAGGALALQAQGHNGAGDVKVNGALASGGAMAVNAVRDATIGGNASSSGALAV SAGRNVTASGTAGANGDVTLTATGGNLAVGGAVTSQGNFNATSGGALALNGELVNGNTTL TAGGTATLSGAFLGLGLATINAGGSVNGGGSLTFGKDITVGAGSGMTLGAIQGAGQFTAT SVGDMSLGATTAVGNVSAKSTGGSVSVGGDLQSGGNVTILASKSATVVGAVSSMGTVNVT GTQGNVSVAGVSSNGDTTMSAGQTLTLSGTSTVAGQFTLSGGNVTLSGSQGGSKNVSVTA QGALDASGASMVSTQNMQFSGTNVTLGTAIVGGALTATASNQLSLVGAAVDAVGAATLTA GNGFYNASQVLSGGALYVSAPNVTNAANASLASTSTTTINATNFTNAGLVNGSTTNVTVA GGLNNSGGSLMAVNSLNINTGTFNNQNGIIFAGNPNTPNGPTTGDVSLTINGGDGSFNNG GGQLLAQRNMGVSAVNMAFDPSQGTISQGGQLSITAASISNSGTWNYGGQGVTLTGVYGI NNYGTMTGTAPLTLSTNGTFTNFGQVSGGNVTFNGTLSNVAGAVMHAADSLTLNGNVTNR GTIESAGNLAFNGGGNYDNQYGLTQANGNITLNTGGTVYNTVGTITAGGNIGITAGAVIN DALQGPTQTYTQQVSASADPDLLNGIVVGTVTGWGCTLSQGDCYLGSHTASATIATLKPD LTNGYVDVRSGGSTCYGDDSACQYVEVGNSLAGDHQYVSLPGIDRTVTAPGAVSPGVIAA GGSVNISAGTLSNAGSTISAGLDVNLNLQSLNNAPVGNATATIVDTVNKAQLDAFMAQMY AIGLVGIYGTVHVAISGTVVPESTVTFDSSASVPPSSVSTNTAFGSQGQIVAGRNMTLSG GNLVNGGLLYAGNNFNASAAQSFSNQGQYNSVTTTQPGSSMRGGNPSSTTFSYAQQSATV FAGNDLVIAAGQISNTYGSLLAGHNIVIGGVGTTATSTTPAQSLNNTSGNIVAGNNIALN VAGAISNTLPPPVTLHQNYGATEQYNGCMTAGGYKESYCEAYVDQQSGNSSVISAGNNLQ INAGSLTNIGSLIAAGTSATINVAGPVVNEAQTLNAYWHSHWVQETGDFSPDKRHDVWAC GSVAQCTALYGSAYTSAGGTIDPPTPVDNIAATIQAPNLSITSTGEIRNVGNVIGTYVSL TGQKLINGITTANTYTPRVNAPSQVISLSLVNLPGLHLSTPRSVGGALPTPVAGKASYVT GTLDGSALGAVSPQALLKNLPSSLQPSSTLFYYDPQAEDLMLQQAALQQTGQASFVNGLS YDSTRNLSVTDQEKAILYQNAIDYAKQNNLQLGNALSQAQINALSEPMLWYVQQSVPDPS CLSTGVVACPTVSALMPQVYLPPNWSAMSAGGNITGQNVSLDFNQGGQGSILNTGNIAAS NTLTVNTGTLTNQANQVNVGDVWQYIAATGYLKTSGTEVQPGGFMSAADMNLNVQTLNQI GGALQLLGSDTTVDQAGTEQLLASLQQQLGTNFTQTTVTDHLDTSFTAIGGFGAADIVGM AFAVVVSIMTAGAASAAIGATLGTTAGSTFAAGTAATTATATSAATVATTAGLGNMALSA AFAGFTSSIASQLTMTGSLDWGSAFEAAGVAGITAGLTNGITYNSDTGFDFTTAPLTVGG PTSSLASLAGVNPSIGTTVNQATASTASTLETRALAMLAEAGISAGVGTAIEGGSLLGAF QNALIQETAASGAYAIGDGTAPLSIENILGHAVLGCAASSLSGTGCTGGAIGAATSAMLS PLAIIAMDPTGAPLTEGQAAVVTALSVLTGGVAAGLAGGDAQAGATWAENEATNNSEKHT ADILKACLQSSFCSAMLPAPAKIAAIGYVASAMGSSKDDSGNNLPQLPDHPGNNDDDLSG GSQGQHASGFTLAGTPIPVCVPYGGCTFVIVPVPTPFSLPSIGAIFSTGNGSDSGNSGDS TKSANNDTTKGGVNSATNKGGIIIDGKIGGQLGARGWTQQEVQAVVDEGPVGTTMDNRSA GKTPDGLPRNDSASVYGSKSGYVVVNDRTGEVVQVSGKNDPGWIPDSRIKWK