Protein Info for ABIE53_000852 in Paraburkholderia graminis OAS925

Annotation: putative amidohydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 298 PF00795: CN_hydrolase" amino acids 35 to 287 (253 residues), 198.3 bits, see alignment E=7.5e-63

Best Hits

KEGG orthology group: None (inferred from 91% identity to bgf:BC1003_0453)

Predicted SEED Role

"FIG003879: Predicted amidohydrolase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (298 amino acids)

>ABIE53_000852 putative amidohydrolase (Paraburkholderia graminis OAS925)
MSETHVSSSSSHASSDTALDSAQRERASSQSSSFRVAALQMVSTPDRERNLADAERLIAE
AAADGAQLVLLPEYFCFMGFKDTDKLAVREAYRDGPIQRFLADAARRHKVWVIGGTLPIT
APEPSRVLNTTLVFDPEGNEAARYDKIHLFNFEKGEESFDEARTICPGGEVRTFESPFGR
VGLSVCYDLRFPELYRRLGDCALMVVPSAFTYTTGRAHWEMLLRARAVENQCYVLAAAQG
GKHENGRRTWGHSMLIDPWGEVVAVRDEGAGVVAGTLERTRIDEVRQSLPAWRHRVLS