Protein Info for ABIE51_RS18130 in Lysobacter sp. OAE881

Annotation: glycosyltransferase family 2 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 467 transmembrane" amino acids 6 to 32 (27 residues), see Phobius details amino acids 232 to 254 (23 residues), see Phobius details amino acids 336 to 356 (21 residues), see Phobius details amino acids 363 to 407 (45 residues), see Phobius details amino acids 418 to 435 (18 residues), see Phobius details PF13641: Glyco_tranf_2_3" amino acids 56 to 323 (268 residues), 82.2 bits, see alignment E=1.1e-26 PF00535: Glycos_transf_2" amino acids 59 to 201 (143 residues), 75.2 bits, see alignment E=1.2e-24 PF13632: Glyco_trans_2_3" amino acids 166 to 392 (227 residues), 66.1 bits, see alignment E=8.2e-22

Best Hits

KEGG orthology group: None (inferred from 77% identity to psa:PST_0048)

Predicted SEED Role

"glycosyl transferase, family 2"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (467 amino acids)

>ABIE51_RS18130 glycosyltransferase family 2 protein (Lysobacter sp. OAE881)
MSGEFLFALQLFFIGYFVLLNGGYLVLNLLSMLSLRSYMRQRAEYGTDAPYLGIEPAISL
LVPGYNEEATIRTSVRSMLQLQYPDFEVVVINDGSKDGTLAALVEEFELVPHPELVRRAV
PHKPIRGVYRSLRYGNLRVIDKENGGKADALNVGINVARNRLFCAVDADSILQRDSLLRI
VQPFIEDERTVAAGGTVRIANGSEVRGGFLVKSGLPRNLLARMQIIEYLRAFLFGRLGWS
PLNGVLIISGAFGLFDRARVEAVGGYRTDTVGEDMELVVRLHRWHRRKRIAYRIRYLPDP
ICWTEAPEDLGTLGRQRSRWQRGLAESLMFHPPWRFGWRAGAAGYLAWPFMALFEWVGPL
IELTGYVFMIVGFLMGWVSPVAFTVFIAVALGMGILLSVNGLLLEALSFRVYNRSRDMLW
LFAMAVLENFGYRQLNTLWRCRGMWQWMSRRKHQWGAMKRSGQWGRM