Protein Info for ABIE51_RS17930 in Lysobacter sp. OAE881

Annotation: alpha/beta fold hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 262 PF01738: DLH" amino acids 19 to 122 (104 residues), 23.9 bits, see alignment E=1.2e-08 PF02129: Peptidase_S15" amino acids 26 to 123 (98 residues), 28.7 bits, see alignment E=5e-10 PF00561: Abhydrolase_1" amino acids 31 to 123 (93 residues), 36 bits, see alignment E=2.9e-12 PF12697: Abhydrolase_6" amino acids 31 to 225 (195 residues), 43.6 bits, see alignment E=2.6e-14 PF00326: Peptidase_S9" amino acids 53 to 241 (189 residues), 52.8 bits, see alignment E=1.7e-17 PF07859: Abhydrolase_3" amino acids 78 to 182 (105 residues), 27.3 bits, see alignment E=1.4e-09 PF05728: UPF0227" amino acids 99 to 222 (124 residues), 24.4 bits, see alignment E=1.2e-08

Best Hits

KEGG orthology group: K06889, (no description) (inferred from 66% identity to psu:Psesu_1107)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (262 amino acids)

>ABIE51_RS17930 alpha/beta fold hydrolase (Lysobacter sp. OAE881)
MDVSLETIELAVEQERISGTVLSPPSQLPGVLFVHGWGGSQEHDLVRAREAAGIGCVCLT
FDLRGHERTARHWEKVNRPQNLADLLAAYDWLAARPNVDPDAIAVVGISYGGYLAALMTA
QRPVRWLALRSPAIYRDEGWKRPKLQLHIDTDLVAYRQRRMDWQENAVLRACAEYRGHAL
LVAAEHDTVVPHPVIDNYANALHNTRSLTRRVIEGADHAFSQKPAQKAYQTILVKWLAEM
IMGAREEAAMTKLRERKVEDAE