Protein Info for ABIE51_RS14270 in Lysobacter sp. OAE881

Annotation: cell envelope integrity protein CreD

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 440 transmembrane" amino acids 7 to 28 (22 residues), see Phobius details amino acids 299 to 317 (19 residues), see Phobius details amino acids 325 to 345 (21 residues), see Phobius details amino acids 351 to 372 (22 residues), see Phobius details amino acids 379 to 397 (19 residues), see Phobius details amino acids 403 to 422 (20 residues), see Phobius details PF06123: CreD" amino acids 3 to 428 (426 residues), 456.7 bits, see alignment E=4.1e-141

Best Hits

Predicted SEED Role

"Inner membrane protein CreD"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (440 amino acids)

>ABIE51_RS14270 cell envelope integrity protein CreD (Lysobacter sp. OAE881)
MRLFLKIGFVAAMTIAILIPLLMIRGVISDRQMYRAQAVADISRSYAGAQSFAGPVLVVP
YTEEVEVEEADQFNVVRKVRRAKTSQWVFFPTALDVRGTLVPDTRKRGLHEVRVYEWKGK
ATARFNAVIPNEGDPAARQIGRPWLSYGVADVRGLRSTPVLRVNGAELPLLEGQGARDGS
GLHVRLDAPRAGQTLDLSTELDVVLGGTETLSLVPMGRRNRFALDSSWQHPSFSGTSPRQ
DADARGFRADWDIASVASNAQGKFLAGSSLAELAREEGVSVSLIDPVDIYTQADRATKYG
LLFVVLTFVGFFLFELIKQLPIHPIQYGLVGLALAIFFLLLVSLSEHIRFLYAYLAASVA
CIGLLGFYLSAVLRSTARGLGFAAMLATLYAALYGLLVSEDNALVLGAGLLFLVLATVMV
VTRKVDWYQVAGARPAVRQA