Protein Info for ABIE51_RS13180 in Lysobacter sp. OAE881

Annotation: ferrous iron transport protein B

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 618 transmembrane" amino acids 216 to 240 (25 residues), see Phobius details amino acids 275 to 300 (26 residues), see Phobius details amino acids 323 to 343 (21 residues), see Phobius details amino acids 355 to 380 (26 residues), see Phobius details amino acids 392 to 414 (23 residues), see Phobius details amino acids 456 to 476 (21 residues), see Phobius details amino acids 493 to 517 (25 residues), see Phobius details amino acids 519 to 538 (20 residues), see Phobius details amino acids 550 to 570 (21 residues), see Phobius details amino acids 590 to 612 (23 residues), see Phobius details PF02421: FeoB_N" amino acids 2 to 160 (159 residues), 182.1 bits, see alignment E=1.1e-57 PF01926: MMR_HSR1" amino acids 2 to 119 (118 residues), 65.2 bits, see alignment E=1.2e-21 TIGR00437: ferrous iron transport protein B" amino acids 189 to 583 (395 residues), 321.9 bits, see alignment E=4.6e-100 PF07670: Gate" amino acids 283 to 379 (97 residues), 83.7 bits, see alignment E=2.4e-27 amino acids 455 to 587 (133 residues), 57.1 bits, see alignment E=4.4e-19 PF07664: FeoB_C" amino acids 397 to 449 (53 residues), 54.9 bits, see alignment 1.1e-18

Best Hits

KEGG orthology group: K04759, ferrous iron transport protein B (inferred from 80% identity to psu:Psesu_1644)

Predicted SEED Role

"Ferrous iron transport protein B" in subsystem Campylobacter Iron Metabolism or Iron acquisition in Vibrio or Transport of Iron

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (618 amino acids)

>ABIE51_RS13180 ferrous iron transport protein B (Lysobacter sp. OAE881)
MRVALIGNPNCGKTALFNQLTGSRQKVANYAGVTVERKEGRFHAPSGRHYAVLDLPGAYS
LHAASLDEAVARDVCRGFYPGEPAPDVLVCVVDATNLRLHLRFALEVRELGRPMVLAVNM
MDAAKRRGIEVDLAALERELGVPVVPTVAVRNGGARELVAMLDRVAGKLHEPSAHLPADL
VHDPDALHAETRRLLSLAVTMPRRTAEVDDALDRWLLHPVLGLVSLAVVMFLIFQAVYAW
ATPLMDLIEAGTGALGETVGSVMPDGPLRSLMLDGIIAGLGGVIVFLPQILILFAFILAL
EESGYLPRAAFLLDRLMSRAGLSGRSFIPLLSSFACAVPGIMATRSIQDPRDRLATILVA
PLMTCSARLPVYALLIGAFIPQRQVAGGLLNLQGLVLFGLYAAGIASALAVSWIMKKWRR
DKSEHALLLELPSYRIPHPRDLLIGLWERAWIFLRRVGGIILALTILLWFLLSFPAAPAG
ATGPAIDYSFAGRIGHALTAVFAPIGFNWQICIALIPGLAAREVAVSSLATVYALSAASD
EAAAQALSPIITGSWSLATALSLLVWFIYAPQCISTLATIRRETNSWKQVAIATGYLFGL
AYLASFATYHIAMALGAG