Protein Info for ABIE51_RS12095 in Lysobacter sp. OAE881

Annotation: MIP/aquaporin family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 219 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details transmembrane" amino acids 38 to 64 (27 residues), see Phobius details amino acids 85 to 105 (21 residues), see Phobius details amino acids 124 to 143 (20 residues), see Phobius details amino acids 149 to 171 (23 residues), see Phobius details amino acids 194 to 214 (21 residues), see Phobius details PF00230: MIP" amino acids 4 to 141 (138 residues), 63.8 bits, see alignment E=1e-21

Best Hits

KEGG orthology group: None (inferred from 61% identity to tin:Tint_3039)

MetaCyc: 57% identical to aquaglyceroporin (Sinorhizobium meliloti)
TRANS-RXN0-551

Predicted SEED Role

"Aquaporin Z"

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (219 amino acids)

>ABIE51_RS12095 MIP/aquaporin family protein (Lysobacter sp. OAE881)
MPLSRRLTAEFTGTALLLAAIVGSGIMGEALSRGNAAVALLANAAATAGALYALIVILAP
ISGAHFNPAVTVVAHLHGDLSRRDAVAYIVVQTVAAIAGVLLAHAMFDLPLLQAGTHVRT
GASQWLSEAVATFGLILTIVLGVRHRPAAVPALVASYIFAAYWFTASTSFANPAVTLARA
LTATFAGIRPEDVAAFVAAQAVGTFVAIKTVGFLRPAHA