Protein Info for ABIE51_RS10910 in Lysobacter sp. OAE881

Annotation: cellulase family glycosylhydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 386 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF00150: Cellulase" amino acids 81 to 284 (204 residues), 24.5 bits, see alignment E=9e-10

Best Hits

KEGG orthology group: None (inferred from 60% identity to aba:Acid345_0317)

Predicted SEED Role

"FIG00653930: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (386 amino acids)

>ABIE51_RS10910 cellulase family glycosylhydrolase (Lysobacter sp. OAE881)
MFKWLPKLLVAAALAGASLAQPALAAPGERWSQEEANAWYAKQPWLVGSNYIPANAINQL
EMWQAETFDPKRIDLELGWAQDMGMNTMRVFLHDMAWHQDPKGFKRRLETFLQISAKHGI
KPMLVLFDSCWDPDPKLGPQRPPIPGVHNSGWVQGPGTAALDDPKQHARLEAYVKDIVGT
YAKDDRVLAWDVWNEPDNEGGGSGFYQPRESKHKFDRVAELLPQVFAWARTQKPTQPLTS
GLWHNPDWNKLEGLNRVEKAQVELSDVISFHTYAWPEDFAQRVQELQVYGRPLLCTEYLA
RGAGSTIDGVLPVAKKLNVGMYNWGFVDGKTQTRFPWDSWERPYTQKPPTLWFHDLLHGD
GKPYRAREIEIIRALSRAPKNEVPAL