Protein Info for ABIE51_RS10505 in Lysobacter sp. OAE881

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 378 signal peptide" amino acids 1 to 11 (11 residues), see Phobius details transmembrane" amino acids 12 to 27 (16 residues), see Phobius details amino acids 42 to 62 (21 residues), see Phobius details amino acids 74 to 97 (24 residues), see Phobius details amino acids 103 to 121 (19 residues), see Phobius details amino acids 133 to 154 (22 residues), see Phobius details amino acids 160 to 181 (22 residues), see Phobius details amino acids 202 to 226 (25 residues), see Phobius details amino acids 238 to 258 (21 residues), see Phobius details amino acids 267 to 286 (20 residues), see Phobius details amino acids 292 to 314 (23 residues), see Phobius details amino acids 323 to 347 (25 residues), see Phobius details amino acids 353 to 373 (21 residues), see Phobius details PF07690: MFS_1" amino acids 13 to 239 (227 residues), 62.4 bits, see alignment E=1.9e-21 amino acids 207 to 374 (168 residues), 45.3 bits, see alignment E=2.9e-16

Best Hits

KEGG orthology group: None (inferred from 52% identity to xau:Xaut_4144)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (378 amino acids)

>ABIE51_RS10505 MFS transporter (Lysobacter sp. OAE881)
MRPGTGAARLALLAGAGIFGVTYGLTSPLIALELTRRGHGEFVIGLNASMQALGVLTVAL
WLPRATSAFGVHRVLLLALLAVAAVLCVFPMLPWLWLWFPLRYALGIGSESVMVTTETWT
SQLSDDARRATHMAAYTATVSIGMALGPLLLAHVGSGDAVPFLFAAALTAIAMVTTARVR
VAPLDATEPTSPIGLRTLMRDAPVALAATALNAALETAGLSFLPLYAMKLGWSERGATSL
ISTLLIGAIVLQLPIGWLGDRVDRRRLVLLFGALSALGALVWPFAIATPSVAYALMFVWG
GVFVGIYTLMVAIVGSRYRGSALVGAYAGMSVAFGMGALAGPMLAGLAMAGMLHGLPLFA
AAACAAFTVFAWRVRKRW